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a9 PEPTIDE
Authors
De Luca, S., Verdoliva, V., Saviano, M., Fattorusso, R., Diana, D.
Assembly
GLN-ASP-VAL-ASN-THR-ALA-VAL-ALA-TRP
Entity
1. GLN-ASP-VAL-ASN-THR-ALA-VAL-ALA-TRP (polymer, Thiol state: not present), 9 monomers, 1003.065 Da Detail

QDVNTAVAW


Formula weight
1003.065 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 91.7 %, Completeness (bb): 94.4 % Detail

Polymer type: polypeptide(L)

Total1H
All91.7 % (44 of 48)91.7 % (44 of 48)
Backbone94.4 % (17 of 18)94.4 % (17 of 18)
Sidechain90.0 % (27 of 30)90.0 % (27 of 30)
Aromatic83.3 % (5 of 6)83.3 % (5 of 6)
Methyl100.0 % (7 of 7)100.0 % (7 of 7)

1. entity 1

QDVNTAVAW

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.8, Details 1 mM 1H A9, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1A9 PEPTIDEnatural abundance1 mM

Protein Blocks Logo
Calculated from 20 models in PDB: 6S0N, Strand ID: A Detail


Release date
2019-10-23
Citation
SPR and NMR characterization of the molecular interaction between A9 peptide and a model system of HER2 receptor: A fragment approach for selecting peptide structures specific for their target
De Luca, S., Verdoliva, V., Saviano, M., Fattorusso, R., Diana, D.
J. Pept. Sci. (2020), 26, e3231-e3231, PubMed 31749266 , DOI 10.1002/psc.3231 ,
Related entities 1. GLN-ASP-VAL-ASN-THR-ALA-VAL-ALA-TRP, : 1 : 32 entities Detail
Experiments performed 3 experiments Detail
Chemical shift validation 3 contents Detail
Keywords Her2 receptor, PEPTIDE BINDING PROTEIN, SPR technique, Saturation Transfer Difference, peptide-protein interaction