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Solution NMR structure of the SH3 domain of human Caskin1
Authors
Toke, O., Koprivanacz, K., Radnai, L., Mero, B., Juhasz, T., Liliom, K., Buday, L.
Assembly
Caskin-1
Entity
1. Caskin-1 (polymer), 67 monomers, 7448.224 Da Detail

GSHMLQVRAT KDYCNNYDLT SLNVKAGDII TVLEQHPDGR WKGCIHDNRT GNDRVGYFPS SLGEAIV


Formula weight
7448.224 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chemcal Shifts
1H: 400, 13C: 101, 15N: 69 assignments Detail
IDEntity IDSeq IDComp IDAtom IDAtom typeValVal errAmbig. code
112SERHAH5.350
212SERHB2H3.810
312SERHB3H3.810
412SERCAC58.30
512SERCBC63.80
613HISHH8.510
713HISHAH4.640
813HISHB2H3.080
913HISHB3H3.080
1013HISCAC56.20
1113HISCBC30.60
1213HISNN121.10
1314METHH8.230
1414METHAH4.400
1514METHB2H1.830
1614METHB3H1.830
1714METHG2H2.420
1814METHG3H2.420
1914METCAC55.30
2014METCBC33.40
2114METNN1220
2215LEUHH8.530
2315LEUHAH4.390
2415LEUHB2H1.640
2515LEUHB3H10
2615LEUHD11H0.930
2715LEUHD12H0.930
2815LEUHD13H0.930
2915LEUHD21H0.810
3015LEUHD22H0.810
3115LEUHD23H0.810
3215LEUCAC55.80
3315LEUNN125.20
3416GLNHH8.520
3516GLNHAH5.600
3616GLNHB2H1.920
3716GLNHB3H1.660
3816GLNHG2H2.290
3916GLNHG3H2.290
4016GLNHE21H7.180
4116GLNHE22H6.790
4216GLNCAC53.90
4316GLNCBC33.10
4416GLNNN122.50
4516GLNNE2N111.50
4617VALHH8.970
4717VALHAH4.970
4817VALHBH1.840
4917VALHG11H0.880
5017VALHG12H0.880
5117VALHG13H0.880
5217VALHG21H0.880
5317VALHG22H0.880
5417VALHG23H0.880
5517VALCAC58.30
5617VALCBC35.50
5717VALNN1120
5818ARGHH9.060
5918ARGHAH5.130
6018ARGHB2H1.770
6118ARGHB3H1.830
6218ARGHG2H1.390
6318ARGHG3H1.50
6418ARGHD2H3.210
6518ARGHD3H3.260
6618ARGCAC53.50
6718ARGCBC32.50
6818ARGNN122.10
6919ALAHH9.210
7019ALAHAH4.520
7119ALAHB1H1.410
7219ALAHB2H1.410
7319ALAHB3H1.410
7419ALACAC52.30
7519ALACBC20.40
7619ALANN128.70
77110THRHH9.360
78110THRHAH4.290
79110THRHBH4.420
80110THRHG21H1.270
81110THRHG22H1.270
82110THRHG23H1.270
83110THRCAC62.60
84110THRCBC69.50
85110THRNN115.50
86111LYSHH7.390
87111LYSHAH4.600
88111LYSHB2H2.020
89111LYSHB3H2.020
90111LYSHG2H1.450
91111LYSHG3H1.400
92111LYSHD2H1.720
93111LYSHD3H1.70
94111LYSHE2H2.980
95111LYSHE3H2.980
96111LYSNN117.10
97112ASPHH8.140
98112ASPHAH4.600
99112ASPHB2H2.710
100112ASPHB3H2.630
101112ASPCAC54.00
102112ASPCBC41.60
103112ASPNN116.50
104113TYRHH9.040
105113TYRHAH4.610
106113TYRHB2H3.030
107113TYRHB3H2.670
108113TYRHD1H7.440
109113TYRHD2H7.440
110113TYRHE1H7.070
111113TYRHE2H7.070
112113TYRCAC58.80
113113TYRCBC42.70
114113TYRNN120.80
115114CYSHH8.090
116114CYSHAH4.420
117114CYSHB2H2.750
118114CYSHB3H2.700
119114CYSCAC57.10
120114CYSCBC28.20
121114CYSNN125.70
122115ASNHH8.850
123115ASNHAH4.810
124115ASNHB2H2.430
125115ASNHB3H2.990
126115ASNHD21H7.320
127115ASNHD22H7.120
128115ASNCAC51.50
129115ASNCBC38.60
130115ASNNN124.70
131115ASNND2N110.80
132116ASNHAH4.340
133116ASNHB2H2.550
134116ASNHB3H2.290
135116ASNHD21H7.350
136116ASNHD22H6.650
137116ASNCAC54.50
138116ASNCBC38.20
139116ASNND2N112.10
140117TYRHH7.960
141117TYRHAH4.450
142117TYRHB2H3.210
143117TYRHB3H2.940
144117TYRHD1H7.880
145117TYRHD2H7.880
146117TYRHE1H7.160
147117TYRHE2H7.160
148117TYRCAC58.30
149117TYRCBC38.10
150117TYRNN1160
151118ASPHH7.130
152118ASPHAH4.850
153118ASPHB2H2.780
154118ASPHB3H2.630
155118ASPCAC52.10
156118ASPCBC41.60
157118ASPNN117.60
158119LEUHH9.000
159119LEUHAH4.350
160119LEUHB2H1.780
161119LEUNN126.10
162120THRHH8.490
163120THRHAH4.790
164120THRHG21H1.320
165120THRHG22H1.320
166120THRHG23H1.320
167120THRCAC61.90
168120THRCBC69.40
169120THRNN108.20
170121SERHH7.850
171121SERHAH4.990
172121SERHB2H4.290
173121SERHB3H4.240
174121SERCAC59.10
175121SERCBC65.30
176121SERNN118.20
177122LEUHH9.330
178122LEUHAH4.260
179122LEUHB2H1.640
180122LEUHB3H1.260
181122LEUHD11H0.650
182122LEUHD12H0.650
183122LEUHD13H0.650
184122LEUHD21H10
185122LEUHD22H10
186122LEUHD23H10
187122LEUNN126.50
188123ASNHH8.460
189123ASNHAH5.020
190123ASNHB2H2.720
191123ASNHB3H2.720
192123ASNHD21H7.560
193123ASNHD22H6.910
194123ASNCAC53.30
195123ASNCBC38.60
196123ASNNN124.10
197123ASNND2N112.40
198124VALHH9.290
199124VALHAH4.100
200124VALHBH2.150
201124VALHG11H0.850
202124VALHG12H0.850
203124VALHG13H0.850
204124VALHG21H0.850
205124VALHG22H0.850
206124VALHG23H0.850
207124VALCAC61.90
208124VALCBC35.40
209124VALNN126.90
210125LYSHH9.260
211125LYSHAH4.880
212125LYSHB2H1.700
213125LYSHB3H1.700
214125LYSHG2H1.420
215125LYSHG3H1.420
216125LYSHE2H2.990
217125LYSHE3H2.990
218125LYSNN130.30
219126ALAHH9.000
220126ALAHAH3.300
221126ALAHB1H1.150
222126ALAHB2H1.150
223126ALAHB3H1.150
224126ALACAC54.00
225126ALACBC17.80
226126ALANN124.20
227127GLYHH8.840
228127GLYHA2H3.450
229127GLYHA3H4.460
230127GLYCAC44.90
231127GLYNN112.20
232128ASPHH8.570
233128ASPHAH4.460
234128ASPHB2H2.700
235128ASPHB3H2.270
236128ASPCAC55.80
237128ASPCBC41.60
238128ASPNN122.10
239129ILEHH8.430
240129ILEHAH4.580
241129ILEHBH1.920
242129ILEHG12H1.750
243129ILEHG13H1.340
244129ILEHG21H0.750
245129ILEHG22H0.750
246129ILEHG23H0.750
247129ILEHD11H0.800
248129ILEHD12H0.800
249129ILEHD13H0.800
250129ILENN120.40
251130ILEHH9.290
252130ILEHAH4.320
253130ILEHG12H1.370
254130ILEHG13H1.450
255130ILEHG21H0.290
256130ILEHG22H0.290
257130ILEHG23H0.290
258130ILEHD11H-0.080
259130ILEHD12H-0.080
260130ILEHD13H-0.080
261130ILENN128.440
262131THRHH9.130
263131THRHAH4.600
264131THRHBH4.150
265131THRHG21H1.130
266131THRHG22H1.130
267131THRHG23H1.130
268131THRCAC63.50
269131THRCBC69.00
270131THRNN124.10
271132VALHH9.310
272132VALHAH4.000
273132VALHBH2.100
274132VALHG11H1.220
275132VALHG12H1.220
276132VALHG13H1.220
277132VALHG21H0.650
278132VALHG22H0.650
279132VALHG23H0.650
280132VALCAC64.60
281132VALCBC31.30
282132VALNN129.40
283133LEUHH9.040
284133LEUHAH4.410
285133LEUHB2H1.600
286133LEUHB3H1.600
287133LEUHGH1.220
288133LEUHD11H0.810
289133LEUHD12H0.810
290133LEUHD13H0.810
291133LEUHD21H-0.050
292133LEUHD22H-0.050
293133LEUHD23H-0.050
294133LEUNN1280
295134GLUHH7.640
296134GLUHAH4.370
297134GLUHB2H1.750
298134GLUHB3H1.840
299134GLUHG2H2.250
300134GLUHG3H2.250
301134GLUCAC55.30
302134GLUCBC34.50
303134GLUNN114.30
304135GLNHH8.390
305135GLNHAH3.050
306135GLNHB2H1.220
307135GLNHB3H1.220
308135GLNHG2H2.020
309135GLNHG3H2.020
310135GLNHE21H6.650
311135GLNHE22H6.270
312135GLNCAC53.70
313135GLNCBC29.60
314135GLNNN122.50
315135GLNNE2N111.50
316136HISHH6.950
317136HISHAH4.880
318136HISHB2H3.310
319136HISHB3H3.280
320136HISCAC55.10
321136HISCBC32.60
322136HISNN121.20
323137PROHAH4.540
324137PROHB2H2.090
325137PROHB3H2.090
326137PROCAC64.80
327137PROCBC32.00
328138ASPHH8.580
329138ASPHAH4.520
330138ASPHB2H2.960
331138ASPHB3H2.680
332138ASPCAC54.00
333138ASPCBC39.80
334138ASPNN117.70
335139GLYHH8.250
336139GLYHA2H3.630
337139GLYHA3H4.170
338139GLYCAC45.40
339139GLYNN1070
340140ARGHH8.230
341140ARGHAH4.530
342140ARGHB2H1.420
343140ARGHB3H1.420
344140ARGHG2H1.920
345140ARGHG3H1.800
346140ARGHD2H2.900
347140ARGHD3H2.900
348140ARGCAC55.50
349140ARGCBC29.10
350140ARGNN123.50
351141TRPHH8.370
352141TRPHAH5.190
353141TRPHB2H2.950
354141TRPHB3H2.000
355141TRPHD1H70
356141TRPHE1H10.080
357141TRPHE3H7.160
358141TRPHZ2H7.230
359141TRPHZ3H6.860
360141TRPHH2H7.410
361141TRPCAC54.40
362141TRPCBC31.80
363141TRPNN126.80
364141TRPNE1N127.50.4
365142LYSHH8.830
366142LYSHAH4.750
367142LYSHB2H1.520
368142LYSHB3H1.520
369142LYSNN120.50
370143GLYHH9.680
371143GLYHA2H3.670
372143GLYHA3H5.350
373143GLYCAC45.40
374143GLYNN114.20
375144CYSHH8.960
376144CYSHAH5.810
377144CYSHB2H2.740
378144CYSHB3H2.740
379144CYSCAC55.20
380144CYSCBC30.70
381144CYSNN116.80
382145ILEHH9.230
383145ILEHAH4.470
384145ILEHG21H0.880
385145ILEHG22H0.880
386145ILEHG23H0.880
387145ILEHD11H0.880
388145ILEHD12H0.880
389145ILEHD13H0.880
390145ILENN121.90
391146HISHH9.130
392146HISHAH5.000
393146HISHB2H3.080
394146HISHB3H3.080
395146HISCAC55.40
396146HISCBC29.70
397146HISNN127.30
398147ASPHH8.340
399147ASPHAH4.690
400147ASPHB2H3.060
401147ASPHB3H2.420
402147ASPCAC53.00
403147ASPCBC42.50
404147ASPNN127.80
405148ASNHH8.940
406148ASNHAH4.400
407148ASNHB2H2.860
408148ASNHB3H2.860
409148ASNHD21H7.70
410148ASNHD22H7.030
411148ASNCAC55.30
412148ASNCBC38.60
413148ASNNN123.80
414148ASNND2N112.60
415149ARGHH8.660
416149ARGHAH4.250
417149ARGHB2H1.990
418149ARGHB3H1.990
419149ARGHG2H1.660
420149ARGHG3H1.660
421149ARGHD2H3.250
422149ARGHD3H3.250
423149ARGCAC58.60
424149ARGCBC30.40
425149ARGNN118.80
426150THRHH7.570
427150THRHAH4.330
428150THRHBH4.310
429150THRHG21H1.1680
430150THRHG22H1.1680
431150THRHG23H1.1680
432150THRCAC61.50
433150THRCBC70.60
434150THRNN105.80
435151GLYHH8.160
436151GLYHA2H3.620
437151GLYHA3H4.200
438151GLYCAC45.70
439151GLYNN110.20
440152ASNHH7.680
441152ASNHAH4.820
442152ASNHB2H2.650
443152ASNHB3H2.650
444152ASNHD21H7.350
445152ASNHD22H6.970
446152ASNCAC52.40
447152ASNCBC40.30
448152ASNNN117.10
449152ASNND2N111.80
450153ASPHH8.510
451153ASPHAH5.350
452153ASPHB2H2.470
453153ASPHB3H2.470
454153ASPCAC54.00
455153ASPCBC43.20
456153ASPNN120.40
457154ARGHH8.810
458154ARGHAH4.690
459154ARGHB2H1.730
460154ARGHB3H1.730
461154ARGHD2H3.320
462154ARGHD3H3.320
463154ARGCAC55.60
464154ARGCBC32.70
465154ARGNN122.60
466155VALHH8.590
467155VALHAH5.320
468155VALHBH1.890
469155VALHG11H0.860
470155VALHG12H0.860
471155VALHG13H0.860
472155VALHG21H0.370
473155VALHG22H0.370
474155VALHG23H0.370
475155VALCAC59.80
476155VALCBC35.40
477155VALNN120.60
478156GLYHH8.670
479156GLYHA2H4.080
480156GLYHA3H4.080
481156GLYCAC45.50
482156GLYNN111.20
483157TYRHH8.930
484157TYRHAH5.970
485157TYRHB2H2.800
486157TYRHB3H2.800
487157TYRCAC58.10
488157TYRCBC40.60
489157TYRNN119.80
490158PHEHH9.610
491158PHEHAH5.040
492158PHEHB2H3.020
493158PHEHB3H2.630
494158PHEHD1H7.590
495158PHEHD2H7.590
496158PHEHE1H7.750
497158PHEHE2H7.750
498158PHECAC55.00
499158PHECBC39.60
500158PHENN119.50
501160SERHAH4.080
502160SERHB2H3.870
503160SERHB3H3.870
504160SERCAC60.30
505160SERCBC60.00
506161SERHH7.560
507161SERHAH4.110
508161SERHB2H3.950
509161SERHB3H3.750
510161SERCAC59.10
511161SERCBC62.70
512161SERNN114.90
513162LEUHH7.780
514162LEUHAH4.230
515162LEUHB2H2.060
516162LEUHB3H1.750
517162LEUHGH1.750
518162LEUHD11H0.840
519162LEUHD12H0.840
520162LEUHD13H0.840
521162LEUHD21H0.840
522162LEUHD22H0.840
523162LEUHD23H0.840
524162LEUNN120.20
525163GLYHH7.740
526163GLYHA2H3.310
527163GLYHA3H4.690
528163GLYCAC44.80
529163GLYNN103.10
530164GLUHH8.730
531164GLUHAH4.710
532164GLUHB2H1.990
533164GLUHB3H1.990
534164GLUHG2H2.310
535164GLUHG3H2.310
536164GLUCAC54.00
537164GLUCBC32.30
538164GLUNN122.50
539165ALAHH8.750
540165ALAHAH4.490
541165ALAHB1H1.450
542165ALAHB2H1.450
543165ALAHB3H1.450
544165ALACAC53.20
545165ALACBC19.00
546165ALANN125.80
547166ILEHH8.450
548166ILEHAH4.150
549166ILEHBH1.830
550166ILEHG12H1.830
551166ILEHG13H1.830
552166ILEHG21H0.940
553166ILEHG22H0.940
554166ILEHG23H0.940
555166ILEHD11H0.940
556166ILEHD12H0.940
557166ILEHD13H0.940
558166ILENN121.90
559167VALHH7.780
560167VALHAH4.130
561167VALHBH2.080
562167VALHG11H0.900
563167VALHG12H0.900
564167VALHG13H0.900
565167VALHG21H0.900
566167VALHG22H0.900
567167VALHG23H0.900
568167VALCAC63.50
569167VALCBC33.60
570167VALNN128.60

Protein Blocks Logo
Calculated from 30 models in PDB: 7ATY, Strand ID: A Detail


Release date
2020-12-02
Citation 1
The SH3 domain of Caskin1 binds to lysophosphatidic acid suggesting a direct role for the lipid in intracellular signaling
Koprivanacz, K., Toke, O., Besztercei, B., Juhasz, T., Radnai, L., Mero, B., Mihaly, J., Peter, M., Balogh, G., Vigh, L., Buday, L., Liliom, K.
Cell. Signal. (2017), 32, 66-75, PubMed 28104445 , DOI 10.1016/j.cellsig.2017.01.019 ,
Citation 2
Solution NMR Structure of the SH3 Domain of Human Caskin1 Validates the Lack of a Typical Peptide Binding Groove and Supports a Role in Lipid Mediator Binding
Toke, O., Koprivanacz, K., Radnai, L., Mero, B., Juhasz, T., Liliom, K., Buday, L.
Cells (2021), 10, 173-173, PubMed 33467043 , DOI 10.3390/cells10010173 ,
Entries sharing articles BMRB: 1 entries Detail
  BMRB: 50543 released on 2020-11-01
    Title Chemical shift assignment of the SH3 domain of human Caskin1
Related entities 1. Caskin-1, : 1 : 6 : 109 entities Detail
Interaction partners 1. Caskin-1, : 11 interactors Detail
Experiments performed 16 experiments Detail
nullKeywords Caskin1, SH3 domain, SIGNALING PROTEIN, lipid signaling, proline-rich motif, protein-lipid interaction