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Solution structure of TLR9 transmembrane and cytoplasmic juxtamembrane regions
Authors
Kornilov, F.D., Shabalkina, A.V., Goncharuk, M.V., Goncharuk, S.A., Arseniev, A.S., Mineev, K.S.
Assembly
Toll-like receptor 9
Entity
1. Toll-like receptor 9 (polymer), 50 monomers, 5800.888 Da Detail

MEALSWDCFA LSLLAVALGL GVPMLHHLCG WDLWYCFHLC LAWLPWRGRQ


Formula weight
5800.888 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chemcal Shifts
1H: 336, 13C: 196, 15N: 53 assignments Detail
IDEntity IDSeq IDComp IDAtom IDAtom typeValVal errAmbig. code
111METHH8.5310.0201
211METHAH4.4710.0201
311METHB2H2.1370.0202
411METHB3H2.0490.0202
511METHG2H2.6340.0202
611METHG3H2.5750.0202
711METCC176.4030.4001
811METCAC55.1250.4001
911METCBC33.4710.4001
1011METCGC32.5120.4001
1111METNN127.8050.4001
1212GLUHH8.7270.0201
1312GLUHAH4.2270.0201
1412GLUHB2H2.0770.0202
1512GLUHB3H2.0020.0202
1612GLUHG2H2.3010.0202
1712GLUHG3H2.3010.0202
1812GLUCC176.4130.4001
1912GLUCAC57.7980.4001
2012GLUCBC29.9750.4001
2112GLUCGC36.5270.4001
2212GLUNN120.9950.4001
2313ALAHH7.9940.0201
2413ALAHAH4.2840.0201
2513ALAHB1H1.3860.0201
2613ALAHB2H1.3860.0201
2713ALAHB3H1.3860.0201
2813ALACC177.2190.4001
2913ALACAC52.6020.4001
3013ALACBC19.6420.4001
3113ALANN122.1930.4001
3214LEUHH7.7540.0201
3314LEUHAH4.3300.0201
3414LEUHB2H1.6150.0202
3514LEUHB3H1.4780.0202
3614LEUHGH1.6610.0201
3714LEUHD11H0.8180.0202
3814LEUHD12H0.8180.0202
3914LEUHD13H0.8180.0202
4014LEUHD21H0.8860.0202
4114LEUHD22H0.8860.0202
4214LEUHD23H0.8860.0202
4314LEUCC176.2170.4001
4414LEUCAC55.0420.4001
4514LEUCBC42.7910.4001
4614LEUCGC27.3280.4001
4714LEUCD1C24.2090.4002
4814LEUCD2C25.5160.4002
4914LEUNN119.4910.4001
5015SERHH7.8720.0201
5115SERHAH4.2540.0201
5215SERHB2H4.0550.0202
5315SERHB3H3.9340.0202
5415SERCC175.5660.4001
5515SERCAC57.4460.4001
5615SERCBC62.9810.4001
5715SERNN115.7580.4001
5816TRPHH8.6100.0201
5916TRPHAH4.5320.0201
6016TRPHB2H3.3930.0202
6116TRPHB3H3.3250.0202
6216TRPHD1H7.4570.0201
6316TRPHE1H10.3190.0201
6416TRPCC176.8270.4001
6516TRPCAC59.7340.4001
6616TRPCBC29.6780.4001
6716TRPNN123.3850.4001
6816TRPNE1N129.4910.4001
6917ASPHH8.5200.0201
7017ASPHAH4.2620.0201
7117ASPHB2H2.5570.0202
7217ASPHB3H2.3970.0202
7317ASPCC177.2920.4001
7417ASPCAC56.3740.4001
7517ASPCBC39.8490.4001
7617ASPNN118.0040.4001
7718CYSHH7.7660.0201
7818CYSHAH4.3280.0201
7918CYSHB2H3.0300.0202
8018CYSHB3H3.0300.0202
8118CYSCC176.8470.4001
8218CYSCAC61.1270.4001
8318CYSCBC27.6320.4001
8418CYSNN118.2220.4001
8519PHEHH8.3580.0201
8619PHEHAH4.4050.0201
8719PHEHB2H3.2620.0202
8819PHEHB3H3.2620.0202
8919PHEHD1H7.2600.0201
9019PHEHD2H7.2600.0201
9119PHECC176.8160.4001
9219PHECAC60.8260.4001
9319PHECBC39.5140.4001
9419PHENN122.0240.4001
95110ALAHH8.3970.0201
96110ALAHAH3.9330.0201
97110ALAHB1H1.5090.0201
98110ALAHB2H1.5090.0201
99110ALAHB3H1.5090.0201
100110ALACC178.8110.4001
101110ALACAC55.4930.4001
102110ALACBC18.9000.4001
103110ALANN121.3910.4001
104111LEUHH7.9850.0201
105111LEUHAH4.1070.0201
106111LEUHB2H1.8980.0202
107111LEUHB3H1.6450.0202
108111LEUHGH1.8370.0201
109111LEUHD11H0.9790.0202
110111LEUHD12H0.9790.0202
111111LEUHD13H0.9790.0202
112111LEUHD21H0.9140.0202
113111LEUHD22H0.9140.0202
114111LEUHD23H0.9140.0202
115111LEUCC179.7510.4001
116111LEUCAC57.9530.4001
117111LEUCBC41.6010.4001
118111LEUCGC27.6400.4001
119111LEUCD1C24.6840.4002
120111LEUCD2C23.7490.4002
121111LEUNN116.3350.4001
122112SERHH8.0550.0201
123112SERHAH4.3060.0201
124112SERHB2H3.9410.0202
125112SERHB3H4.0630.0202
126112SERHGH4.6100.0201
127112SERCC176.4440.4001
128112SERCAC62.2570.4001
129112SERCBC64.6010.4001
130112SERNN116.4250.4001
131113LEUHH7.8670.0201
132113LEUHAH4.0720.0201
133113LEUHB2H1.7510.0202
134113LEUHB3H1.5340.0202
135113LEUHGH1.6340.0201
136113LEUHD11H0.8310.0202
137113LEUHD12H0.8310.0202
138113LEUHD13H0.8310.0202
139113LEUHD21H0.9500.0202
140113LEUHD22H0.9500.0202
141113LEUHD23H0.9500.0202
142113LEUCC178.8830.4001
143113LEUCAC58.0240.4001
144113LEUCBC41.8580.4001
145113LEUCGC27.3130.4001
146113LEUCD1C24.1770.4002
147113LEUCD2C25.6350.4002
148113LEUNN122.1170.4001
149114LEUHH8.0260.0201
150114LEUHAH4.0260.0201
151114LEUHB2H1.8180.0202
152114LEUHB3H1.5290.0202
153114LEUHGH1.8370.0201
154114LEUHD11H0.9520.0202
155114LEUHD12H0.9520.0202
156114LEUHD13H0.9520.0202
157114LEUHD21H0.7920.0202
158114LEUHD22H0.7920.0202
159114LEUHD23H0.7920.0202
160114LEUCC178.1190.4001
161114LEUCAC58.3380.4001
162114LEUCBC41.8870.4001
163114LEUCGC27.2880.4001
164114LEUCD1C25.1270.4002
165114LEUCD2C24.1380.4002
166114LEUNN119.1370.4001
167115ALAHH7.9530.0201
168115ALAHAH4.1090.0201
169115ALAHB1H1.6070.0201
170115ALAHB2H1.6070.0201
171115ALAHB3H1.6070.0201
172115ALACC181.4670.4001
173115ALACAC55.6680.4001
174115ALACBC18.3390.4001
175115ALANN119.6910.4001
176116VALHH7.8070.0201
177116VALHAH3.8490.0201
178116VALHBH2.2910.0201
179116VALHG11H1.0090.0202
180116VALHG12H1.0090.0202
181116VALHG13H1.0090.0202
182116VALHG21H1.1670.0202
183116VALHG22H1.1670.0202
184116VALHG23H1.1670.0202
185116VALCC178.3150.4001
186116VALCAC66.0480.4001
187116VALCBC31.9550.4001
188116VALCG1C21.7600.4002
189116VALCG2C22.8800.4002
190116VALNN118.7310.4001
191117ALAHH8.3080.0201
192117ALAHAH4.0040.0201
193117ALAHB1H1.5420.0201
194117ALAHB2H1.5420.0201
195117ALAHB3H1.5420.0201
196117ALACC179.4310.4001
197117ALACAC55.9140.4001
198117ALACBC18.5330.4001
199117ALANN122.6000.4001
200118LEUHH8.5000.0201
201118LEUHAH4.1170.0201
202118LEUHB2H1.8930.0202
203118LEUHB3H1.6310.0202
204118LEUHGH1.9040.0201
205118LEUHD11H0.9430.0202
206118LEUHD12H0.9430.0202
207118LEUHD13H0.9430.0202
208118LEUHD21H0.8990.0202
209118LEUHD22H0.8990.0202
210118LEUHD23H0.8990.0202
211118LEUCC179.3170.4001
212118LEUCAC57.9470.4001
213118LEUCBC42.0910.4001
214118LEUCGC27.4370.4001
215118LEUCD1C25.8760.4002
216118LEUCD2C23.7720.4002
217118LEUNN115.9100.4001
218119GLYHH8.0280.0201
219119GLYHA2H3.9640.0202
220119GLYHA3H3.9640.0202
221119GLYCC175.4620.4001
222119GLYCAC46.8640.4001
223119GLYNN105.9240.4001
224120LEUHH7.8270.0201
225120LEUHAH4.4850.0201
226120LEUHB2H1.8940.0202
227120LEUHB3H1.5640.0202
228120LEUHGH1.8860.0201
229120LEUHD11H0.9420.0202
230120LEUHD12H0.9420.0202
231120LEUHD13H0.9420.0202
232120LEUHD21H0.9680.0202
233120LEUHD22H0.9680.0202
234120LEUHD23H0.9680.0202
235120LEUCC178.5320.4001
236120LEUCAC56.1340.4001
237120LEUCBC43.5510.4001
238120LEUCGC27.1990.4001
239120LEUCD1C23.8320.4002
240120LEUCD2C26.1510.4002
241120LEUNN118.3650.4001
242121GLYHH8.2810.0201
243121GLYHA2H3.9510.0202
244121GLYHA3H3.8070.0202
245121GLYCC174.5010.4001
246121GLYCAC47.3850.4001
247121GLYNN105.7980.4001
248122VALHH8.1260.0201
249122VALHAH3.8890.0201
250122VALHBH2.3900.0201
251122VALHG11H0.9840.0202
252122VALHG12H0.9840.0202
253122VALHG13H0.9840.0202
254122VALHG21H1.1450.0202
255122VALHG22H1.1450.0202
256122VALHG23H1.1450.0202
257122VALCAC68.1780.4001
258122VALCBC30.1100.4001
259122VALCG1C21.7860.4002
260122VALCG2C24.2600.4002
261122VALNN120.0980.4001
262123PROHAH4.4180.0201
263123PROHB2H1.9020.0202
264123PROHB3H2.4320.0202
265123PROHG2H2.2360.0202
266123PROHG3H2.0390.0202
267123PROHD2H3.7190.0202
268123PROHD3H3.5330.0202
269123PROCC178.8010.4001
270123PROCAC65.8300.4001
271123PROCBC31.2970.4001
272123PROCGC28.5110.4001
273123PROCDC50.4150.4001
274124METHH7.5140.0201
275124METHAH4.3950.0201
276124METHB2H2.3640.0202
277124METHB3H2.1750.0202
278124METHG2H2.6420.0202
279124METHG3H2.7640.0202
280124METHE1H2.1120.0201
281124METHE2H2.1120.0201
282124METHE3H2.1120.0201
283124METCC177.9120.4001
284124METCAC58.0640.4001
285124METCBC32.3660.4001
286124METCGC32.9920.4001
287124METCEC17.7790.4001
288124METNN114.9790.4001
289125LEUHH8.0970.0201
290125LEUHAH4.0920.0201
291125LEUHB2H1.8990.0202
292125LEUHB3H1.7370.0202
293125LEUHGH1.8470.0201
294125LEUHD11H0.8800.0202
295125LEUHD12H0.8800.0202
296125LEUHD13H0.8800.0202
297125LEUHD21H0.9960.0202
298125LEUHD22H0.9960.0202
299125LEUHD23H0.9960.0202
300125LEUCC179.1830.4001
301125LEUCAC57.9240.4001
302125LEUCBC41.8750.4001
303125LEUCGC27.2910.4001
304125LEUCD1C25.3820.4002
305125LEUCD2C21.7120.4002
306125LEUNN119.3930.4001
307126HISHH8.2430.0201
308126HISHAH4.4040.0201
309126HISHB3H3.1990.0202
310126HISCC177.3850.4001
311126HISCAC58.8640.4001
312126HISCBC30.2630.4001
313126HISNN117.8100.4001
314127HISHH7.8210.0201
315127HISHAH4.4310.0201
316127HISHB2H3.2190.0202
317127HISHB3H3.1720.0202
318127HISCC176.5790.4001
319127HISCAC58.5060.4001
320127HISCBC30.5480.4001
321127HISNN117.5110.4001
322128LEUHH7.8990.0201
323128LEUHAH4.0300.0201
324128LEUHB2H1.8180.0202
325128LEUHB3H1.6400.0202
326128LEUHGH1.6400.0201
327128LEUHD11H0.8080.0202
328128LEUHD12H0.8080.0202
329128LEUHD13H0.8080.0202
330128LEUHD21H0.7930.0202
331128LEUHD22H0.7930.0202
332128LEUHD23H0.7930.0202
333128LEUCC177.2090.4001
334128LEUCAC56.6400.4001
335128LEUCBC42.6930.4001
336128LEUCGC27.2000.4001
337128LEUCD1C25.5560.4002
338128LEUCD2C23.9680.4002
339128LEUNN118.2160.4001
340129CYSHH7.7360.0201
341129CYSHAH4.3970.0201
342129CYSHB2H2.8910.0202
343129CYSHB3H2.8910.0202
344129CYSCC174.5580.4001
345129CYSCAC60.2670.4001
346129CYSCBC28.1090.4001
347129CYSNN114.1320.4001
348130GLYHH8.1120.0201
349130GLYHA2H4.0140.0202
350130GLYHA3H3.8840.0202
351130GLYCC174.4910.4001
352130GLYCAC45.8100.4001
353130GLYNN108.6090.4001
354131TRPHH7.7280.0201
355131TRPHAH4.7120.0201
356131TRPHB2H3.2590.0202
357131TRPHB3H3.1980.0202
358131TRPHD1H7.1770.0201
359131TRPHE1H10.0700.0201
360131TRPCC175.5760.4001
361131TRPCAC56.8810.4001
362131TRPCBC29.7240.4001
363131TRPNN121.0320.4001
364131TRPNE1N128.4550.4001
365132ASPHH8.4570.0201
366132ASPHAH4.8380.0201
367132ASPHB2H3.0600.0202
368132ASPHB3H2.7190.0202
369132ASPCC177.0440.4001
370132ASPCAC53.8600.4001
371132ASPCBC41.3060.4001
372132ASPNN120.8490.4001
373133LEUHH8.4360.0201
374133LEUHAH4.0100.0201
375133LEUHB2H1.6290.0202
376133LEUHB3H1.3290.0202
377133LEUHGH1.6320.0201
378133LEUHD11H0.8910.0202
379133LEUHD12H0.8910.0202
380133LEUHD13H0.8910.0202
381133LEUHD21H0.7920.0202
382133LEUHD22H0.7920.0202
383133LEUHD23H0.7920.0202
384133LEUCC178.4490.4001
385133LEUCAC58.2790.4001
386133LEUCBC42.4360.4001
387133LEUCGC27.2820.4001
388133LEUCD1C25.6030.4002
389133LEUCD2C24.0760.4002
390133LEUNN124.8980.4001
391134TRPHH8.1300.0201
392134TRPHAH4.5320.0201
393134TRPHB2H3.4700.0202
394134TRPHB3H3.4700.0202
395134TRPHD1H7.4670.0201
396134TRPHE1H10.3500.0201
397134TRPCC178.6870.4001
398134TRPCAC60.2360.4001
399134TRPCBC29.2670.4001
400134TRPNN118.9050.4001
401134TRPNE1N129.1160.4001
402135TYRHH8.2040.0201
403135TYRHAH4.3200.0201
404135TYRHB2H3.2910.0202
405135TYRHB3H3.1830.0202
406135TYRHD1H7.1870.0201
407135TYRHD2H7.1870.0201
408135TYRCC178.1600.4001
409135TYRCAC61.4720.4001
410135TYRCBC38.5430.4001
411135TYRNN121.1420.4001
412136CYSHH7.9660.0201
413136CYSHAH3.9680.0201
414136CYSHB2H3.2130.0202
415136CYSHB3H2.7370.0202
416136CYSCC176.4440.4001
417136CYSCAC63.9180.4001
418136CYSCBC27.1910.4001
419136CYSNN116.3570.4001
420137PHEHH8.3580.0201
421137PHEHAH4.2580.0201
422137PHEHB2H3.1720.0202
423137PHEHB3H3.1720.0202
424137PHEHD1H6.9650.0201
425137PHEHD2H6.9650.0201
426137PHECC176.7960.4001
427137PHECAC61.0200.4001
428137PHECBC39.0920.4001
429137PHENN119.6000.4001
430138HISHH8.1240.0201
431138HISHAH4.0060.0201
432138HISHB2H3.1280.0202
433138HISHB3H3.1280.0202
434138HISHD2H6.9450.0201
435138HISCC178.0570.4001
436138HISCAC60.1600.4001
437138HISCBC29.4070.4001
438138HISNN117.3070.4001
439139LEUHH7.9190.0201
440139LEUHAH3.9160.0201
441139LEUHB2H1.6750.0202
442139LEUHB3H1.4190.0202
443139LEUHGH1.4240.0201
444139LEUHD11H0.8140.0202
445139LEUHD12H0.8140.0202
446139LEUHD13H0.8140.0202
447139LEUHD21H0.7810.0202
448139LEUHD22H0.7810.0202
449139LEUHD23H0.7810.0202
450139LEUCC178.8110.4001
451139LEUCAC58.0080.4001
452139LEUCBC42.0440.4001
453139LEUCGC26.6120.4001
454139LEUCD1C25.6880.4002
455139LEUCD2C24.0440.4002
456139LEUNN120.6830.4001
457140CYSHH7.6460.0201
458140CYSHAH3.9970.0201
459140CYSHB2H3.0550.0202
460140CYSHB3H2.6720.0202
461140CYSCC176.4550.4001
462140CYSCAC63.1980.4001
463140CYSCBC27.2710.4001
464140CYSNN115.5350.4001
465141LEUHH7.6500.0201
466141LEUHAH3.9430.0201
467141LEUHB2H1.5960.0202
468141LEUHB3H1.5090.0202
469141LEUHGH1.5340.0201
470141LEUHD11H0.7180.0202
471141LEUHD12H0.7180.0202
472141LEUHD13H0.7180.0202
473141LEUHD21H0.6770.0202
474141LEUHD22H0.6770.0202
475141LEUHD23H0.6770.0202
476141LEUCC178.6870.4001
477141LEUCAC57.3490.4001
478141LEUCBC41.7490.4001
479141LEUCGC26.9490.4001
480141LEUCD1C23.5850.4002
481141LEUCD2C25.3730.4002
482141LEUNN117.0460.4001
483142ALAHH7.4740.0201
484142ALAHAH4.1040.0201
485142ALAHB1H1.3600.0201
486142ALAHB2H1.3600.0201
487142ALAHB3H1.3600.0201
488142ALACC178.4180.4001
489142ALACAC54.0180.4001
490142ALACBC18.5960.4001
491142ALANN119.0420.4001
492143TRPHH7.6290.0201
493143TRPHAH4.3960.0201
494143TRPHB2H3.4510.0202
495143TRPHB3H3.2440.0202
496143TRPHD1H7.3430.0201
497143TRPHE1H10.0540.0201
498143TRPCC175.8860.4001
499143TRPCAC57.9830.4001
500143TRPCBC29.7530.4001
501143TRPNN116.9470.4001
502143TRPNE1N128.3600.4001
503144LEUHH7.3040.0201
504144LEUHAH4.2190.0201
505144LEUHB2H1.6920.0202
506144LEUHB3H1.0700.0202
507144LEUHGH1.9080.0201
508144LEUHD11H0.8730.0202
509144LEUHD12H0.8730.0202
510144LEUHD13H0.8730.0202
511144LEUHD21H0.8300.0202
512144LEUHD22H0.8300.0202
513144LEUHD23H0.8300.0202
514144LEUCAC53.4110.4001
515144LEUCBC41.9390.4001
516144LEUCGC26.9430.4001
517144LEUCD1C24.1600.4002
518144LEUCD2C25.5330.4002
519144LEUNN118.9620.4001
520145PROHAH4.4700.0201
521145PROHB2H2.0550.0202
522145PROHB3H1.8420.0202
523145PROHG2H1.8600.0202
524145PROHG3H1.6670.0202
525145PROHD2H3.6810.0202
526145PROHD3H3.1640.0202
527145PROCC175.7310.4001
528145PROCAC63.7870.4001
529145PROCBC30.8370.4001
530145PROCGC27.5020.4001
531145PROCDC50.3840.4001
532146TRPHH7.1430.0201
533146TRPHAH4.6720.0201
534146TRPHB2H3.2640.0202
535146TRPHB3H3.2640.0202
536146TRPHD1H7.3040.0201
537146TRPHE1H10.4190.0201
538146TRPCC175.6790.4001
539146TRPCAC57.9030.4001
540146TRPCBC29.5440.4001
541146TRPNN117.0050.4001
542146TRPNE1N130.6910.4001
543147ARGHH7.8020.0201
544147ARGHAH4.3220.0201
545147ARGHB2H1.8390.0202
546147ARGHB3H1.6700.0202
547147ARGHG2H1.4860.0202
548147ARGHG3H1.4860.0202
549147ARGHD2H3.1610.0202
550147ARGHD3H3.1610.0202
551147ARGCC176.5580.4001
552147ARGCAC56.1290.4001
553147ARGCBC30.9610.4001
554147ARGCGC27.1450.4001
555147ARGCDC43.5740.4001
556147ARGNN120.8630.4001
557148GLYHH7.9870.0201
558148GLYHA2H3.8900.0202
559148GLYHA3H3.8900.0202
560148GLYCC174.0260.4001
561148GLYCAC45.5810.4001
562148GLYNN108.5390.4001
563149ARGHH8.1140.0201
564149ARGHAH4.3560.0201
565149ARGHB2H1.9060.0202
566149ARGHB3H1.7900.0202
567149ARGHG2H1.6770.0202
568149ARGHG3H1.6770.0202
569149ARGHD2H3.2150.0202
570149ARGHD3H3.2150.0202
571149ARGCC175.6480.4001
572149ARGCAC56.3440.4001
573149ARGCBC31.1190.4001
574149ARGCGC27.6530.4001
575149ARGCDC43.6550.4001
576149ARGNN120.5600.4001
577150GLNHH7.9510.0201
578150GLNHAH4.1800.0201
579150GLNHB2H2.1180.0202
580150GLNHB3H1.9280.0202
581150GLNHG2H2.3020.0202
582150GLNCAC57.6490.4001
583150GLNCBC30.7600.4001
584150GLNCGC34.6060.4001
585150GLNNN126.3360.4001

Release date
2022-09-26
Citation
The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors
Kornilov, F.D., Shabalkina, A.V., Cong, L., Volynsky, P.E., Kot, E.F., Kayushin, A.L., Lushpa, V.A., Goncharuk, M.V., Arseniev, A.S., Goncharuk, S.A., Xiaohui, W., Mineev, K.S.
Nat. Commun. (2023), 14, 1503-1503, PubMed 36932058 , DOI 10.1038/s41467-023-37042-6 ,
Entries sharing articles BMRB: 3 entries Detail
  BMRB: 34750 released on 2022-09-26
    Title Solution structure of TLR2 transmembrane and cytoplasmic juxtamembrane regions
  BMRB: 34751 released on 2022-09-26
    Title Solution structure of TLR3 transmembrane and cytoplasmic juxtamembrane regions
  BMRB: 34752 released on 2022-09-26
    Title Solution structure of TLR5 transmembrane and cytoplasmic juxtamembrane regions
Related entities 1. Toll-like receptor 9, : 4 : 11 entities Detail
Interaction partners 1. Toll-like receptor 9, : 6 interactors Detail
Experiments performed 14 experiments Detail
Chemical shift validation 3 contents Detail
Keywords MEMBRANE PROTEIN, PROTEIN