BMRB: 34845

d(ATTTC)3 dimeric structure

Authors

Trajkovski, M., Pastore, A., Plavec, J.

Assembly

DNA (5'-D(*AP*TP*TP*TP*(DNR)P*AP*TP*TP*TP*CP*AP*TP*TP*TP*C)-3')

Entity

1. DNA (5'-D(*AP*TP*TP*TP*(DNR)P*AP*TP*TP*TP*CP*AP*TP*TP*TP*C)-3') (polymer, Thiol state: not present), 15 monomers, 4563.923 × 2 Da Detail

ATTTXATTTC ATTTC

Total weight

9127.846 Da

Max. entity weight

4563.923 Da

Source organism

Homo sapiens

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chemcal Shifts

¹H: 168 assignments Detail

Download

• NMR-STAR v3.1 (partial)
• BMRB/XML (partial)
• CSV
• TSV

ID	Entity ID	Seq ID	Comp ID	Atom ID	Atom type	Val	Val err	Ambig. code
1	1	1	DA	H1'	H	6.201	0.002	1
2	1	1	DA	H2	H	7.970	0.001	1
3	1	1	DA	H2'	H	2.747	0.003	1
4	1	1	DA	H2''	H	2.628	0.004	1
5	1	1	DA	H3'	H	5.071	0.004	1
6	1	1	DA	H4'	H	4.342	0.001	1
7	1	1	DA	H5'	H	3.911	0.004	2
8	1	1	DA	H5''	H	3.911	0.004	2
9	1	1	DA	H8	H	8.542	0.001	1
10	1	2	DT	H1'	H	6.511	0.001	1
11	1	2	DT	H2'	H	2.023	0.005	1
12	1	2	DT	H2''	H	2.429	0.002	1
13	1	2	DT	H3'	H	4.939	0.004	1
14	1	2	DT	H4'	H	4.525	0.001	1
15	1	2	DT	H5'	H	4.352	0.002	1
16	1	2	DT	H5''	H	4.217	0.004	1
17	1	2	DT	H6	H	8.073	0.000	1
18	1	2	DT	H71	H	1.987	0.003	1
19	1	2	DT	H72	H	1.987	0.003	1
20	1	2	DT	H73	H	1.987	0.003	1
21	1	3	DT	H1'	H	5.610	0.001	1
22	1	3	DT	H2'	H	2.197	0.001	1
23	1	3	DT	H2''	H	2.577	0.004	1
24	1	3	DT	H3	H	9.795	0.007	1
25	1	3	DT	H3'	H	4.616	0.001	1
26	1	3	DT	H4'	H	4.210	0.002	1
27	1	3	DT	H5'	H	4.206	0.001	2
28	1	3	DT	H5''	H	4.206	0.001	2
29	1	3	DT	H6	H	7.192	0.001	1
30	1	3	DT	H71	H	1.396	0.002	1
31	1	3	DT	H72	H	1.396	0.002	1
32	1	3	DT	H73	H	1.396	0.002	1
33	1	4	DT	H1'	H	6.320	0.001	1
34	1	4	DT	H2'	H	1.962	0.004	1
35	1	4	DT	H2''	H	2.333	0.001	1
36	1	4	DT	H3	H	11.217	0.003	1
37	1	4	DT	H3'	H	4.897	0.004	1
38	1	4	DT	H4'	H	4.321	0.001	1
39	1	4	DT	H5'	H	4.162	0.001	1
40	1	4	DT	H5''	H	4.097	0.006	1
41	1	4	DT	H6	H	7.668	0.004	1
42	1	4	DT	H71	H	1.297	0.005	1
43	1	4	DT	H72	H	1.297	0.005	1
44	1	4	DT	H73	H	1.297	0.005	1
45	1	5	DNR	H1'	H	5.824	0.002	1
46	1	5	DNR	H2'	H	2.320	0.004	1
47	1	5	DNR	H2''	H	2.077	0.004	1
48	1	5	DNR	H3'	H	4.894	0.002	1
49	1	5	DNR	H4'	H	3.995	0.002	1
50	1	5	DNR	H5	H	5.747	0.004	1
51	1	5	DNR	H5'	H	4.184	0.001	1
52	1	5	DNR	H5''	H	4.047	0.002	1
53	1	5	DNR	H6	H	7.609	0.002	1
54	1	5	DNR	H41	H	8.240	0.003	1
55	1	5	DNR	H42	H	7.551	0.003	1
56	1	5	DNR	HN3	H	14.903	0.005	1
57	1	6	DA	H1'	H	6.642	0.001	1
58	1	6	DA	H2	H	7.730	0.001	1
59	1	6	DA	H2'	H	2.960	0.002	1
60	1	6	DA	H2''	H	3.190	0.001	1
61	1	6	DA	H3'	H	5.099	0.001	1
62	1	6	DA	H4'	H	4.542	0.005	1
63	1	6	DA	H5'	H	4.173	0.006	1
64	1	6	DA	H5''	H	4.036	0.002	1
65	1	6	DA	H8	H	8.489	0.001	1
66	1	6	DA	H61	H	8.166	0.003	1
67	1	6	DA	H62	H	6.117	0.004	1
68	1	7	DT	H1'	H	6.317	0.001	1
69	1	7	DT	H2'	H	2.118	0.002	1
70	1	7	DT	H2''	H	2.532	0.004	1
71	1	7	DT	H3	H	13.872	0.005	1
72	1	7	DT	H3'	H	4.953	0.004	1
73	1	7	DT	H4'	H	4.169	0.002	1
74	1	7	DT	H5'	H	4.521	0.002	1
75	1	7	DT	H5''	H	4.243	0.002	1
76	1	7	DT	H6	H	7.240	0.002	1
77	1	7	DT	H71	H	1.216	0.001	1
78	1	7	DT	H72	H	1.216	0.001	1
79	1	7	DT	H73	H	1.216	0.001	1
80	1	8	DT	H1'	H	6.454	0.001	1
81	1	8	DT	H2'	H	2.330	0.003	1
82	1	8	DT	H2''	H	2.800	0.003	1
83	1	8	DT	H3'	H	4.746	0.002	1
84	1	8	DT	H4'	H	4.363	0.000	1
85	1	8	DT	H5'	H	4.263	0.005	1
86	1	8	DT	H5''	H	4.161	0.004	1
87	1	8	DT	H6	H	7.775	0.000	1
88	1	8	DT	H71	H	1.956	0.001	1
89	1	8	DT	H72	H	1.956	0.001	1
90	1	8	DT	H73	H	1.956	0.001	1
91	1	9	DT	H1'	H	6.106	0.001	1
92	1	9	DT	H2'	H	1.816	0.005	1
93	1	9	DT	H2''	H	2.119	0.001	1
94	1	9	DT	H3'	H	4.677	0.004	1
95	1	9	DT	H4'	H	2.861	0.002	1
96	1	9	DT	H5'	H	4.278	0.002	1
97	1	9	DT	H5''	H	4.129	0.003	1
98	1	9	DT	H6	H	7.648	0.001	1
99	1	9	DT	H71	H	1.597	0.002	1
100	1	9	DT	H72	H	1.597	0.002	1
101	1	9	DT	H73	H	1.597	0.002	1
102	1	10	DC	H1'	H	5.898	0.001	1
103	1	10	DC	H2'	H	1.854	0.002	1
104	1	10	DC	H2''	H	2.521	0.002	1
105	1	10	DC	H3'	H	4.600	0.001	1
106	1	10	DC	H4'	H	4.408	0.002	1
107	1	10	DC	H5	H	5.072	0.006	1
108	1	10	DC	H5'	H	3.468	0.002	1
109	1	10	DC	H5''	H	2.335	0.001	1
110	1	10	DC	H6	H	7.092	0.001	1
111	1	11	DA	H1'	H	6.258	0.006	1
112	1	11	DA	H2	H	8.032	0.001	1
113	1	11	DA	H2'	H	2.791	0.001	1
114	1	11	DA	H2''	H	2.935	0.002	1
115	1	11	DA	H3'	H	4.946	0.000	1
116	1	11	DA	H4'	H	4.405	0.002	1
117	1	11	DA	H5'	H	4.084	0.004	2
118	1	11	DA	H5''	H	4.084	0.004	2
119	1	11	DA	H8	H	8.430	0.001	1
120	1	11	DA	H61	H	8.710	0.004	1
121	1	11	DA	H62	H	8.162	0.003	1
122	1	12	DT	H1'	H	5.925	0.003	1
123	1	12	DT	H2'	H	1.985	0.004	1
124	1	12	DT	H2''	H	2.195	0.005	1
125	1	12	DT	H3	H	13.993	0.004	1
126	1	12	DT	H3'	H	4.729	0.004	1
127	1	12	DT	H4'	H	4.596	0.006	1
128	1	12	DT	H5'	H	4.327	0.001	1
129	1	12	DT	H5''	H	3.878	0.004	1
130	1	12	DT	H6	H	7.148	0.001	1
131	1	12	DT	H71	H	1.363	0.002	1
132	1	12	DT	H72	H	1.363	0.002	1
133	1	12	DT	H73	H	1.363	0.002	1
134	1	13	DT	H1'	H	6.241	0.006	1
135	1	13	DT	H2'	H	1.948	0.004	1
136	1	13	DT	H2''	H	2.398	0.003	1
137	1	13	DT	H3	H	10.221	0.002	1
138	1	13	DT	H3'	H	4.969	0.007	1
139	1	13	DT	H4'	H	4.556	0.004	1
140	1	13	DT	H5'	H	4.394	0.003	1
141	1	13	DT	H5''	H	4.086	0.005	1
142	1	13	DT	H6	H	7.996	0.001	1
143	1	13	DT	H71	H	2.139	0.002	1
144	1	13	DT	H72	H	2.139	0.002	1
145	1	13	DT	H73	H	2.139	0.002	1
146	1	14	DT	H1'	H	4.197	0.002	1
147	1	14	DT	H2'	H	1.749	0.003	1
148	1	14	DT	H2''	H	2.056	0.002	1
149	1	14	DT	H3	H	10.547	0.002	1
150	1	14	DT	H3'	H	4.728	0.004	1
151	1	14	DT	H4'	H	4.204	0.000	1
152	1	14	DT	H5'	H	4.076	0.003	2
153	1	14	DT	H5''	H	4.076	0.003	2
154	1	14	DT	H6	H	7.573	0.001	1
155	1	14	DT	H71	H	1.269	0.001	1
156	1	14	DT	H72	H	1.269	0.001	1
157	1	14	DT	H73	H	1.269	0.001	1
158	1	15	DC	H1'	H	6.165	0.004	1
159	1	15	DC	H2'	H	2.353	0.005	1
160	1	15	DC	H2''	H	2.313	0.003	1
161	1	15	DC	H3'	H	4.382	0.001	1
162	1	15	DC	H4'	H	3.921	0.003	1
163	1	15	DC	H5	H	5.814	0.004	1
164	1	15	DC	H5'	H	4.026	0.002	1
165	1	15	DC	H5''	H	3.994	0.001	1
166	1	15	DC	H6	H	7.591	0.003	1
167	1	15	DC	H41	H	9.686	0.005	1
168	1	15	DC	H42	H	8.573	0.003	1

Release date

2023-11-14

Citation

Dimeric NMR structures of DNA ATTTC repeats in neurodegenerative diseases promoted by divalent cations
Trajkovski, M., Pastore, A., Plavec, J.

Experiments performed 5 experiments Detail

Chemical shift validation 3 contents Detail