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SOLUTION STRUCTURE OF LYS42 ACETYLATED HUMAN SUMO2
Authors
Naik, M.T., Naik, N., Shih, H., Huang, T.
Assembly
Small ubiquitin-related modifier 1
Entity
1. Small ubiquitin-related modifier 1 (polymer, Thiol state: all free), 107 monomers, 12263.47 Da Detail

MGSSHHHHHH SQDPMADEKP KEGVKTENND HINLKVAGQD GSVVQFKIKR HTPLSXLMKA YCERQGLSMR QIRFRFDGQP INETDTPAQL EMEDEDTIDV FQQQTGG


Formula weight
12263.47 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
TORSION ANGLE DYNAMICS, DGSA- DISTANCE GEOMETRY SIMULATED ANNEALING
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 87.9 %, Completeness: 87.1 %, Completeness (bb): 86.7 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All87.1 % (1069 of 1228)87.2 % (565 of 648)86.2 % (401 of 465)89.6 % (103 of 115)
Backbone86.7 % (543 of 626)87.4 % (188 of 215)85.5 % (265 of 310)89.1 % (90 of 101)
Sidechain87.3 % (611 of 700)87.1 % (377 of 433)87.4 % (221 of 253)92.9 % (13 of 14)
Aromatic68.8 % (55 of 80)70.0 % (28 of 40)67.5 % (27 of 40)
Methyl100.0 % (80 of 80)100.0 % (40 of 40)100.0 % (40 of 40)

1. Small ubiquitin-related modifier 2

MGSSHHHHHH SQDPMADEKP KEGVKTENND HINLKVAGQD GSVVQFKIKR HTPLSXLMKA YCERQGLSMR QIRFRFDGQP INETDTPAQL EMEDEDTIDV FQQQTGG

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 290 (±0.1) K, pH 6.5 (±0.05), Details 1 mM [U-100% 13C; U-100% 15N; U-80% 2H] SUMO2 K42Ac, 10 mM potassium phosphate, 100 mM potassium chloride, 2 mM DTT, 0.1 mM EDTA, 0.001 % sodium azide, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1DTTnatural abundance2 mM
2EDTAnatural abundance0.1 mM
3SUMO2 K42Ac[U-100% 13C; U-100% 15N; U-80% 2H]protein1 mM
4potassium chloridenatural abundancesalt100 mM
5potassium phosphatenatural abundancebuffer10 mM
6sodium azidenatural abundance0.001 %
7H2Onatural abundancesolvent90 %
8D2O[U-2H]solvent10 %

LACS Plot; CA
Referencing offset: -0.09 ppm, Outliers: 5 Detail
LACS Plot; CB
Referencing offset: -0.09 ppm, Outliers: 5 Detail
LACS Plot; HA
Referencing offset: 0.0 ppm, Outliers: 3 Detail
LACS Plot; CO
Referencing offset: 0.2 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 5GHB, Strand ID: A Detail


Release date
2016-07-04
Citation
Structures Of Human Sumo
Naik, M.T., Naik, N., Shih, H., Huang, T.
Related entities 1. Small ubiquitin-related modifier 1, : 1 : 13 : 69 entities Detail
Interaction partners 1. Small ubiquitin-related modifier 1, : 34 interactors Detail
Experiments performed 21 experiments Detail
NMR combined restraints 6 contents Detail
Keywords ACETYLATED PROTEIN, STRUCTURAL GENOMICS, UBIQUITIN-LIKE PROTEIN