BMRB: 4416

Solution-State Structure of a DNA Dodecamer Duplex Containing a Cis-Syn Thymine Cyclobutane Dimer.

Authors

McAteer, K., Jing, Y., Kao, J., Taylor, J., Kennedy, M.A.

Assembly

Cis-syn thymine cyclobutane dimer

Entity

1. Cis-syn thymine cyclobutane dimer strand 1 (polymer), 12 monomers, 3758.415 Da Detail

GCACGAATTA AG

2. Cis-syn thymine cyclobutane dimer strand 2 (polymer), 12 monomers, 3691.349 Da Detail

CTTAATTCGT GC

Total weight

7449.764 Da

Max. entity weight

3758.415 Da

Exptl. method

NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete1

Sequence coverage: 50.0 %, Completeness: 38.5 %, Completeness (bb): 37.0 % Detail

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Polymer type: polydeoxyribonucleotide

	Total	1H	31P
All	38.5 % (99 of 257)	37.8 % (88 of 233)	45.8 % (11 of 24)
Suger, PO4	37.0 % (71 of 192)	35.7 % (60 of 168)	45.8 % (11 of 24)
Nucleobase	43.1 % (28 of 65)	43.1 % (28 of 65)
Aromatic	45.8 % (22 of 48)	45.8 % (22 of 48)
Methyl	28.6 % (2 of 7)	28.6 % (2 of 7)

1. Cis-syn thymine cyclobutane dimer strand 1

GCACGAATTA AG

2. Cis-syn thymine cyclobutane dimer strand 2

CTTAATTCGT GC

Show sample condition

Sample

Temperature 278 (±1) K

#	Name	Isotope labeling	Type	Concentration
1	Cis-syn thymine cyclobutane dimer			1.2 mM

Hide sample codition

Chem. Shift Complete2

Sequence coverage: 50.0 %, Completeness: 39.1 %, Completeness (bb): 37.0 % Detail

Download

• NMR-STAR v3.1 (partial)
• BMRB/XML (partial)
• CSV
• TSV

Polymer type: polydeoxyribonucleotide

	Total	1H	31P
All	39.1 % (201 of 514)	38.4 % (179 of 466)	45.8 % (22 of 48)
Suger, PO4	37.0 % (142 of 384)	35.7 % (120 of 336)	45.8 % (22 of 48)
Nucleobase	45.4 % (59 of 130)	45.4 % (59 of 130)
Aromatic	47.9 % (46 of 96)	47.9 % (46 of 96)
Methyl	50.0 % (7 of 14)	50.0 % (7 of 14)

1. Cis-syn thymine cyclobutane dimer strand 1

GCACGAATTA AG

2. Cis-syn thymine cyclobutane dimer strand 2

CTTAATTCGT GC

Show sample condition

Sample

Temperature 278 (±1) K

#	Name	Isotope labeling	Type	Concentration
1	Cis-syn thymine cyclobutane dimer			1.2 mM

Hide sample codition

Release date

2000-06-16

Citation

Solution-state structure of a DNA dodecamer duplex containing a Cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA
McAteer, K., Jing, Y., Kao, J., Taylor, J., Kennedy, M.A.
J. Mol. Biol. (1998), 282, 1013-1032, PubMed 9753551 , DOI 10.1006/jmbi.1998.2062 , Abstract

Experiments performed 4 experiments Detail