BMRBj - BMREntryMaster

Found 1 Document (2.237 seconds)

BMRB: 4553

1DGQ

Assignment of 1H, 13C and 15N Resonances of the I-domain of Human Leukocyte Function Associated Antigen-1

Authors

Kriwacki, R.W., Legge, G.B., Hommel, U., Ramage, P., Chung, J., Tennant, L.L., Wright, P.E., Dyson, H.JANE.

Assembly

Inserted domain of the leukocyte function associated antigen-1 in the presence of magnesium

Entity

1. Leukocyte Function Associated Antigen-1 Inserted-Domain (polymer, Thiol state: not present), 189 monomers, 21528.49 Da Detail

MASKGNVDLV FLFDGSMSLQ PDEFQKILDF MKDVMKKLSN TSYQFAAVQF STSYKTEFDF SDYVKWKDPD ALLKHVKHML LLTNTFGAIN YVATEVFREE LGARPDATKV LIIITDGEAT DSGNIDAAKD IIRYIIGIGK HFQTKESQET LHKFASKPAS EFVKILDTFE KLKDLFTELQ KKIYVIEGM

2. MAGNESIUM ION (non-polymer), 24.305 Da

Total weight

21552.795 Da

Max. entity weight

21528.49 Da

Source organism

Homo sapiens

Exptl. method

NMR

Refine. method

TORSION ANGLE DYNAMICS SIMULATED ANNEALING

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 98.4 %, Completeness: 90.3 %, Completeness (bb): 84.3 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	90.3 % (2065 of 2288)	97.7 % (1157 of 1184)	79.4 % (719 of 906)	95.5 % (189 of 198)
Backbone	84.3 % (949 of 1126)	98.2 % (376 of 383)	70.4 % (393 of 558)	97.3 % (180 of 185)
Sidechain	96.3 % (1293 of 1342)	97.5 % (781 of 801)	95.3 % (503 of 528)	69.2 % (9 of 13)
Aromatic	93.4 % (211 of 226)	99.1 % (112 of 113)	87.5 % (98 of 112)	100.0 % (1 of 1)
Methyl	99.1 % (218 of 220)	99.1 % (109 of 110)	99.1 % (109 of 110)

1. Leukocyte Function Associated Antigen-1 Inserted-Domain

Show sample condition

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	TSP	methyl protons	external	direct	0.2514495
¹H	TSP	methyl protons	external	direct	1.0
¹⁵N	TSP	methyl protons	external	direct	0.101329

Referencing offset: 0.15 ppm, Outliers: 1 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	TSP	methyl protons	external	direct	0.2514495
¹H	TSP	methyl protons	external	direct	1.0
¹⁵N	TSP	methyl protons	external	direct	0.101329

Referencing offset: 0.15 ppm, Outliers: 1 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	TSP	methyl protons	external	direct	0.2514495
¹H	TSP	methyl protons	external	direct	1.0
¹⁵N	TSP	methyl protons	external	direct	0.101329

Referencing offset: -0.04 ppm, Outliers: 1 Detail

Protein Blocks Logo

Calculated from 22 models in PDB: 1DGQ, Strand ID: A Detail

Release date

1999-12-12

Citation 1

Assignment of 1H, 13C and 15N resonances of the I-domain of human leukocyte function associated antigen-1
Kriwacki, R.W., Legge, G.B., Hommel, U., Ramage, P., Chung, J., Tennant, L.L., Wright, P.E., Dyson, H.JANE.
J. Biomol. NMR (2000), 16, 271-272, PubMed 10805135 , DOI: , Abstract

Show more 2 citaions

Citation 2

NMR solution structure of the inserted domain of human leukocyte function associated antigen-1
Legge, G.B., Kriwacki, R.W., Chung, J., Hommel, U., Ramage, P., Case, D.A., Dyson, H.J., Wright, P.E.
J. Mol. Biol. (2000), 295, 1251-1264, PubMed 10653701 , DOI 10.1006/jmbi.1999.3409 , Abstract

Citation 3

Structural basis for LFA-1 inhibition upon lovastatin binding to the CD11a I-domain
Kallen, J., Welzenbach, K., Ramage, P., Geyl, D., Kriwacki, R., Legge, G., Cottens, S., Weitz-Schmidt, G., Hommel, U.
J. Mol. Biol. (1999), 292, 1-9, PubMed 10493852 , DOI 10.1006/jmbi.1999.3047 , Abstract

Hide non-primary 2 citaions

Entries sharing articles Swiss-Prot: 1 entries Detail

Swiss-Prot: P20701 released on 1991-02-01
Title ITAL_HUMAN Entity Integrin alpha-L

Related entities 1. Leukocyte Function Associated Antigen-1 Inserted-Domain, : 1 : 40 : 304 entities Detail

Interaction partners 1. Leukocyte Function Associated Antigen-1 Inserted-Domain, : 9 interactors Detail

More details for 9 interactors identified by 8 citations

Experiments performed 13 experiments Detail

1 HNCA

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

2 HNCO

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

3 HN(CA)CO

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

4 HNCACB

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

5 CBCA(CO)NH

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

6 HBHA(CO)NH

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

7 1H-15N TOCSY

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

8 CC(CO)NH TOSCY

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

9 HCCH COSY

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

10 HCCH TOCSY

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

11 HCCH TOCSY (aromatic)

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

12 2D 13C HSQC

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

13 3D HB(CBCG)CDHD

Instrument

#1 Model Bruker DMX (750 MHz)

#2 Model Bruker DMX (600 MHz)

#3 Model Bruker AMX (500 MHz)

Sample #1

Temperature 295 (±1) K

#	Name	Isotope labeling	Concentration
1	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-13C; U-15N]	1.2 mM
2	NaH2PO4		10 mM
3	MgSO4		10 mM
4	NaCl		150 mM
5	NaN3		0.05 %
6	2H2O		5 %

Sample #2

Temperature 295 (±1) K

#	Name	Isotope labeling	Type	Concentration
7	Leukocyte Function Associated Antigen-1 Inserted-Domain	[U-15N]		1.2 mM

nullKeywords LFA-1 NMR assignment

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Found 1 Document (2.237 seconds)

BMRB: 4553

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Chemical shift reference

Chemical shift reference

Chemical shift reference

Entries sharing articles Swiss-Prot: 1 entries Detail

Related entities 1. Leukocyte Function Associated Antigen-1 Inserted-Domain, : 1 : 40 : 304 entities Detail

Interaction partners 1. Leukocyte Function Associated Antigen-1 Inserted-Domain, : 9 interactors Detail

Experiments performed 13 experiments Detail

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