BMRB: 4993

Spatial structure of Zervamicin IIB bound to DPC micelles.

Authors

Shenkarev, Z.O., Balashova, T.A., Efremov, R.G., Yakimenko, Z.A., Ovchinnikova, T.V., Raap, J., Arseniev, A.S.

Assembly

Zervamicin IIB

Entity

1. Zervamicin IIB (polymer, Thiol state: not present), 17 monomers, 1823.182 Da Detail

XWIQXITXLX XQXXXPX

Formula weight

1823.182 Da

Source organism

Emericellopsis salmosynnemata

Exptl. method

NMR

Refine. method

SIMULATED ANNELING. ENERGY MINIMISATION.

Data set

assigned_chemical_shifts, coupling_constants

Chem. Shift Complete

Sequence coverage: 47.1 %, Completeness: 89.2 %, Completeness (bb): 80.4 % Detail

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Polymer type: polypeptide(L)

	Total	1H	13C	15N
All	89.2 % (99 of 111)	94.8 % (55 of 58)	79.1 % (34 of 43)	100.0 % (10 of 10)
Backbone	80.4 % (37 of 46)	93.3 % (14 of 15)	66.7 % (16 of 24)	100.0 % (7 of 7)
Sidechain	95.9 % (70 of 73)	95.3 % (41 of 43)	96.3 % (26 of 27)	100.0 % (3 of 3)
Aromatic	100.0 % (12 of 12)	100.0 % (6 of 6)	100.0 % (5 of 5)	100.0 % (1 of 1)
Methyl	100.0 % (14 of 14)	100.0 % (7 of 7)	100.0 % (7 of 7)

1. Zervamicin IIB

XWIQXITXLX XQXXXPX

Show sample condition

Sample

Temperature 303 (±1) K, pH 6.8 (±0.2)

#	Name	Isotope labeling	Type	Concentration
1	Zervamicin IIB			1.8 mM
2	DPC			70 mM

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Calculated from 20 models in PDB: 1IH9, Strand ID: A Detail

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Coupling constant

8 J values in 1 lists
Field strength (¹H) 600 MHz, Temperature 303 (±1) K, pH 6.8 (±0.2) Detail

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Temperature 303 (±1) K, pH 6.8 (±0.2)

List #1 J_values_set_1, Field strength (¹H) 600 MHz

Release date

2002-04-03

Citation

Spatial structure of zervamicin IIB bound to DPC micelles: implications for voltage-gating
Shenkarev, Z.O., Balashova, T.A., Efremov, R.G., Yakimenko, Z.A., Ovchinnikova, T.V., Raap, J., Arseniev, A.S.
Biophys. J. (2002), 82, 762-771, PubMed 11806918 , DOI 10.1016/S0006-3495(02)75438-6 , Abstract

Experiments performed 3 experiments Detail