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Chemical shift assignments for EC005 from E. coli
Authors
Yee, A., Chang, X., Pineda_Lucena, A., Wu, B., Semesi, A., Le, B., Ramelot, T., Lee, G.M., Bhattacharyya, S., Gutierrez, P., Denisov, A., Lee, C.H., Cort, J.R., Kozlov, G., Liao, J., Finak, G., Chen, L., Wishart, D., Lee, W., McIntosh, L.P., Gehring, K., Kennedy, M.A., Edwards, A.M., Arrowsmith, C.H.
Assembly
EC005
Entity
1. EC005 (polymer, Thiol state: all free), 97 monomers, 10802.20 Da Detail

MGSSHHHHHH SSGLVPRGSH MKNIVPDYRL DMVGEPCPYP AVATLEAMPQ LKKGEILEVV SDCPQSINNI PLDARNHGYT VLDIQQDGPT IRYLIQK


Formula weight
10802.2 Da
Source organism
Escherichia coli
Exptl. method
NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 71.1 %, Completeness: 45.2 %, Completeness (bb): 55.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All45.2 % (502 of 1110)52.1 % (302 of 580)31.6 % (137 of 433)64.9 % (63 of 97)
Backbone55.5 % (313 of 564)65.6 % (126 of 192)44.0 % (125 of 284)70.5 % (62 of 88)
Sidechain39.0 % (248 of 636)45.4 % (176 of 388)29.7 % (71 of 239)11.1 % (1 of 9)
Aromatic 9.4 % (6 of 64)12.5 % (4 of 32) 6.3 % (2 of 32)
Methyl43.1 % (44 of 102)66.7 % (34 of 51)19.6 % (10 of 51)

1. EC005

MGSSHHHHHH SSGLVPRGSH MKNIVPDYRL DMVGEPCPYP AVATLEAMPQ LKKGEILEVV SDCPQSINNI PLDARNHGYT VLDIQQDGPT IRYLIQK

Sample #1

Temperature 310 (±1) K, pH 7.5 (±0.1)


#NameIsotope labelingTypeConcentration
1EC005[U-15N]2.0 mM
2phosphate buffer50 mM
3NaCl0.15 M
4DTT1 mM
5NaN31 mM
Sample #2

Temperature 310 (±1) K, pH 7.5 (±0.1)


#NameIsotope labelingTypeConcentration
6EC005[U-15N; U-13C]2.0 mM
7phosphate buffer50 mM
8NaCl0.15 M
9DTT1 mM
10NaN31 mM
Sample #3

Temperature 310 (±1) K, pH 7.5 (±0.1)


#NameIsotope labelingTypeConcentration
11EC0052.0 mM
12phosphate buffer50 mM
13NaCl0.15 M
14DTT1 mM
15NaN31 mM

LACS Plot; CA
Referencing offset: -0.55 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.55 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.5 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 1JE3, Strand ID: A Detail


Release date
2002-08-21
Citation 1
An NMR approach to structural proteomics
Yee, A., Chang, X., Pineda_Lucena, A., Wu, B., Semesi, A., Le, B., Ramelot, T., Lee, G.M., Bhattacharyya, S., Gutierrez, P., Denisov, A., Lee, C.H., Cort, J.R., Kozlov, G., Liao, J., Finak, G., Chen, L., Wishart, D., Lee, W., McIntosh, L.P., Gehring, K., Kennedy, M.A., Edwards, A.M., Arrowsmith, C.H.
Proc. Natl. Acad. Sci. U. S. A. (2002), 99, 1825-1830, PubMed 11854485 , DOI 10.1073/pnas.042684599 ,
Citation 2
A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map
Itoh, T., Aiba, H., Baba, T., Hayashi, K., Inada, T., Isono, K., Kasai, H., Kimura, S., Kitakawa, M., Kitagawa, M., Makino, K., Miki, T., Mizobuchi, K., Mori, H., Mori, T., Motomura, K., Nakade, S., Nakamura, Y., Nashimoto, H., Nishio, Y., Oshima, T., Saito, N., Sampei, G., Seki, Y., Horiuchi, T.
DNA Res. (1996), 3, 379-392, PubMed 9097040 , DOI: ,
Related entities 1. EC005, : 1 : 26 entities Detail
Experiments performed 6 experiments Detail
nullKeywords Structural genomics