BMRB: 5111

Solution structure of HSER (ACE)IWGC(BSE)GKLICTTA analogue of HIV GP41 600-612 loop

Authors

Phan Chan Du, A., Limal, D., Semetey, V., Dali, H., Jolivet, M., Desgranges, C., Cung, M.T., Briand, J.P., Petit, M.C., Muller, S.

Assembly

HSER (ACE)IWGC(BSE)GKLICTTA analogue of HIV GP41

Entity

1. HSER (ACE)IWGC(BSE)GKLICTTA analogue of HIV GP41 (polymer, Thiol state: all disulfide bound), 14 monomers, 1392.685 Da Detail

XIWGCXGKLI CTTA

Formula weight

1392.685 Da

Entity Connection

disulfide 1 Detail

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ID	Type	Value order	Atom ID 1	Atom ID 2
1	disulfide	sing	1:CYS5:SG	1:CYS11:SG

Source organism

Human immunodeficiency virus

Exptl. method

NMR

Refine. method

torsion angle dynamics , molecular dynamics, energy minimization

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 85.7 %, Completeness: 97.0 %, Completeness (bb): 100.0 % Detail

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Polymer type: polypeptide(L)

	Total	1H
All	97.0 % (64 of 66)	97.0 % (64 of 66)
Backbone	100.0 % (26 of 26)	100.0 % (26 of 26)
Sidechain	95.0 % (38 of 40)	95.0 % (38 of 40)
Aromatic	83.3 % (5 of 6)	83.3 % (5 of 6)
Methyl	100.0 % (9 of 9)	100.0 % (9 of 9)

1. HSER

XIWGCXGKLI CTTA

Show sample condition

Sample

Pressure 1 atm, Temperature 298 K

#	Name	Isotope labeling	Type	Concentration
1	HSER			2 mM
2	DMSO	[U-2H]		100 %

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Protein Blocks Logo

Calculated from 27 models in PDB: 1J8N, Strand ID: A Detail

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Release date

2015-04-15

Citation

Structural and Immunological Characterization of Heteroclitic Peptide Analogues Corresponding to the 600-612 Region of the HIV Envelope gp41 Glycoprotein
Du, A.P.C., Limal, D., Semetey, V., Dali, H., Jolivet, M., Desgranges, C., Cung, M.T., Briand, J.P., Petit, M.C., Muller, S.
J. Mol. Biol. (2002), 323, 503-521, DOI 10.1016/s0022-2836(02)00701-5

Related entities 1. HSER (ACE)IWGC(BSE)GKLICTTA analogue of HIV GP41, : 1 : 24 : 115 entities Detail

Interaction partners 1. HSER (ACE)IWGC(BSE)GKLICTTA analogue of HIV GP41, : 1 interactors Detail

Experiments performed 3 experiments Detail