BMRB: 5553

Solution structure of influenza A virus C4 promoter

Authors

Lee, M., Bae, S., Park, C., Cheong, H., Cheong, C., Choi, B.

Assembly

C4 promoter of influneza A virus

Entity

1. C4 promoter of influneza A virus (polymer, Thiol state: not present), 31 monomers, 9974.881 Da Detail

AGUAGAAACA AGGCUUCGGC CUGCUUUCGC U

Formula weight

9974.881 Da

Source organism

Alphainfluenzavirus

Exptl. method

NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 93.5 %, Completeness: 22.7 %, Completeness (bb): 9.7 % Detail

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Polymer type: polyribonucleotide

	Total	13C	15N	31P
All	22.7 % (58 of 256)	13.9 % (29 of 209)	68.8 % (11 of 16)	58.1 % (18 of 31)
Suger, PO4	9.7 % (18 of 186)	0.0 % (0 of 155)		58.1 % (18 of 31)
Nucleobase	57.1 % (40 of 70)	53.7 % (29 of 54)	68.8 % (11 of 16)
Aromatic	57.1 % (40 of 70)	53.7 % (29 of 54)	68.8 % (11 of 16)

1. C4 promoter of influneza A virus

AGUAGAAACA AGGCUUCGGC CUGCUUUCGC U

Show sample condition

Sample

#	Name	Isotope labeling	Type	Concentration
6	C4 promoter of influneza A virus	[U-13C; U-15N]		1 mM
7	H2O			90 %
8	D2O			10 %

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Release date

2003-03-13

Citation

A single-nucleotide natural variation (U4 to C4) in an influenza A virus promoter exhibits a large structural change: implications for differential viral RNA synthesis by RNA-dependent RNA polymerase
Lee, M., Bae, S., Park, C., Cheong, H., Cheong, C., Choi, B.
Nucleic Acids Res. (2003), 31, 1216-1223, PubMed 12582241 , DOI: , Abstract

Related entities 1. C4 promoter of influneza A virus, : 1 : 2 : 3 entities Detail

Experiments performed 3 experiments Detail