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Backbone and Sidechain 1H, 13C, and 15N Chemical Shift Assignments and Backbone 15N Relaxation Parameters for Murine Ets-1 deltaN301
Authors
Lee, G.M., Donaldson, L.W., Pufall, M.A., Kang, H., Gentile, L.N., Pot, I., Graves, B.J., McIntosh, L.P.
Assembly
Murine Ets-1 deltaN301
Entity
1. Murine Ets-1 deltaN301 (polymer, Thiol state: all free), 140 monomers, 16226.30 Da Detail

KGTFKDYVRD RADLNKDKPV IPAAALAGYT GSGPIQLWQF LLELLTDKSC QSFISWTGDG WEFKLSDPDE VARRWGKRKN KPKMNYEKLS RGLRYYYDKN IIHKTAGKRY VYRFVSDLQS LLGYTPEELH AMLDVKPDAD


Formula weight
16226.3 Da
Source organism
Mus musculus
Exptl. method
NMR
Refine. method
molecular dynamics
Data set
assigned_chemical_shifts, heteronucl_T1_relaxation, heteronucl_T2_relaxation, heteronucl_NOEs, order_parameters
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 97.7 %, Completeness (bb): 97.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All97.7 % (1663 of 1703)98.0 % (876 of 894)96.8 % (643 of 664)99.3 % (144 of 145)
Backbone97.5 % (805 of 826)98.6 % (279 of 283)96.1 % (394 of 410)99.2 % (132 of 133)
Sidechain98.1 % (988 of 1007)97.9 % (598 of 611)98.4 % (378 of 384)100.0 % (12 of 12)
Aromatic97.8 % (174 of 178)97.8 % (87 of 89)97.6 % (83 of 85)100.0 % (4 of 4)
Methyl97.0 % (130 of 134)97.0 % (65 of 67)97.0 % (65 of 67)

1. Ets-1

KGTFKDYVRD RADLNKDKPV IPAAALAGYT GSGPIQLWQF LLELLTDKSC QSFISWTGDG WEFKLSDPDE VARRWGKRKN KPKMNYEKLS RGLRYYYDKN IIHKTAGKRY VYRFVSDLQS LLGYTPEELH AMLDVKPDAD

Sample #1

Temperature 301 (±1) K, pH 6.5 (±0.1), Details Samples irreversibly aggregated at NMR conditions after approximately 1 week.


#NameIsotope labelingTypeConcentration
1Ets-1[U-99% 15N; U-99% 13C]0.3 ~ 0.8 mM
2phosphate buffer20 mM
3NaCl500 mM
4DTT5 mM
5NaN30.02 %
Sample #2

Temperature 301 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
6Ets-1[U-99% 15N]0.3 ~ 0.8 mM
Sample #3

Temperature 301 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
7Ets-1[U-98% 15N; U-98% 13C; U-97% 2H]0.3 ~ 0.8 mM
Sample #4

Temperature 301 (±1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
8Ets-1[U-99% 15N; U-10% 13C]0.3 ~ 0.8 mM

LACS Plot; CA
Referencing offset: 0.13 ppm, Outliers: 2 Detail
LACS Plot; CB
Referencing offset: 0.13 ppm, Outliers: 2 Detail
LACS Plot; HA
Referencing offset: -0.04 ppm, Outliers: 3 Detail
LACS Plot; CO
Referencing offset: -0.08 ppm, Outliers: 3 Detail
Protein Blocks Logo
Calculated from 25 models in PDB: 1R36, Strand ID: A Detail


Heteronucl. T1
125 T1 values in 1 lists
Coherence Sz, Field strength (1H) 500 MHz, Temperature 301 (±1) K, pH 6.5 (±0.1) Detail
Heteronucl. T2
125 T2 values in 1 lists
Coherence S(+,-), Field strength (1H) 500 MHz, Temperature 301 (±1) K, pH 6.5 (±0.1) Detail
Heteronucl. NOE
125 NOE values in 1 lists
Value type na, Field strength (1H) 500 MHz, Temperature 301 (±1) K, pH 6.5 (±0.1) Detail
Heteronucl. T1/T2
125 T1/T2 values in 1 lists
Field strength (1H) 500 MHz, Temperature 301 (±1) K, pH 6.5 (±0.1) Detail
Order parameters
124 S2 values in 1 lists
Temperature 301 (±1) K, pH 6.5 (±0.1) Detail
Release date
2005-04-25
Citation
The structural and dynamic basis of Ets-1 DNA binding autoinhibition
Lee, G.M., Donaldson, L.W., Pufall, M.A., Kang, H., Pot, I., Graves, B.J., McIntosh, L.P.
J. Biol. Chem. (2005), 280, 7088-7099, PubMed 15591056 , DOI 10.1074/jbc.M410722200 ,
Related entities 1. Murine Ets-1 deltaN301, : 1 : 26 : 31 entities Detail
Interaction partners 1. Murine Ets-1 deltaN301, : 3 interactors Detail
Experiments performed 18 experiments Detail
nullKeywords Ets-1, ETS domain, transcription factor, DNA-binding, autoinhibition, protein dynamics, nuclear magnetic resonance