BMRB: 6511

NMR structure of peptide SD

Authors

Murata, T., Hemmi, H., Nakamura, S., Shimizu, K., Suzuki, Y., Yamaguchi, I.

Assembly

peptide SD

Entity

1. peptide SD (polymer, Thiol state: all disulfide bound), 10 monomers, 1048.192 Da Detail

ACLPWSDGPC

Formula weight

1048.192 Da

Entity Connection

disulfide 1 Detail

---

ID	Type	Value order	Atom ID 1	Atom ID 2
1	disulfide	sing	1:CYS2:SG	1:CYS10:SG

Exptl. method

NMR

Refine. method

simulated annealing,

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 98.1 %, Completeness (bb): 94.7 % Detail

Download

• NMR-STAR v3.1 (partial)
• BMRB/XML (partial)
• CSV
• TSV

Polymer type: polypeptide(L)

	Total	1H
All	98.1 % (52 of 53)	98.1 % (52 of 53)
Backbone	94.7 % (18 of 19)	94.7 % (18 of 19)
Sidechain	100.0 % (34 of 34)	100.0 % (34 of 34)
Aromatic	100.0 % (6 of 6)	100.0 % (6 of 6)
Methyl	100.0 % (3 of 3)	100.0 % (3 of 3)

1. peptide SD

ACLPWSDGPC

Show sample condition

Sample

Pressure 1 atm, Temperature 298 (±0.5) K, pH 5.0 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	peptide SD			5 mM
2	phosphate buffer			50 mM
3	H2O			90 %
4	D2O			10 %

Hide sample codition

Protein Blocks Logo

Calculated from 50 models in PDB: 1YT6, Strand ID: A Detail

---

Release date

2005-02-17

Citation

Structure, epitope mapping and docking simulation of a gibberellin mimic peptide recognized by an anti-gibberellin A4 antibody 4-B8(8)/E9
Murata, T., Hemmi, H., Nakamura, S., Shimizu, K., Suzuki, Y., Yamaguchi, I.
FEBS J. (2005), 272, 4938-4948, PubMed

Related entities 1. peptide SD, : 1 entities Detail

Experiments performed 4 experiments Detail