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Solution structure of 1-26 fragment of human programmed cell death 5 protein
Authors
Liu, D.S., Feng, Y.G., Yao, H.W., Wang, J.F.
Assembly
Programmed cell death protein 5
Entity
1. Programmed cell death protein 5 (polymer, Thiol state: not present), 27 monomers, 2962.148 Da Detail

GSADEELEAL RRQRLAELQA KHGDPGD


Formula weight
2962.148 Da
Source organism
Homo sapiens
Exptl. method
NMR
Refine. method
torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 96.3 %, Completeness: 71.6 %, Completeness (bb): 72.5 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All71.6 % (209 of 292)88.4 % (137 of 155)43.1 % (47 of 109)89.3 % (25 of 28)
Backbone72.5 % (116 of 160)92.9 % (52 of 56)51.3 % (40 of 78)92.3 % (24 of 26)
Sidechain67.9 % (106 of 156)85.9 % (85 of 99)36.4 % (20 of 55)50.0 % (1 of 2)
Aromatic25.0 % (1 of 4)50.0 % (1 of 2) 0.0 % (0 of 2)
Methyl50.0 % (12 of 24)66.7 % (8 of 12)33.3 % (4 of 12)

1. Programmed cell death protein 5

GSADEELEAL RRQRLAELQA KHGDPGD

Sample

Pressure 1 atm, Temperature 298 K, pH 6.5


#NameIsotope labelingTypeConcentration
1Programmed cell death protein 5[U-15N]2.0 ~ 4.0 mM
2Phosphate buffer50 mM
3NaCl200 mM
4DSS0.02 mM
5NaN30.01 mM
6H2O90 %
7D2O10 %

Protein Blocks Logo
Calculated from 20 models in PDB: 1YYB, Strand ID: A Detail


Release date
2006-08-10
Citation
The N-terminal 26-residue fragment of human programmed cell death 5 protein can form a stable alpha-helix having unique electrostatic potential character
Liu, D.S., Yao, H.W., Chen, Y., Feng, Y.G., Chen, Y., Wang, J.F.
Biochem. J. (2005), 392, 47-54, PubMed 16083422 , DOI 10.1042/BJ20050688 ,
Related entities 1. Programmed cell death protein 5, : 1 : 1 : 2 : 20 entities Detail
Interaction partners 1. Programmed cell death protein 5, : 29 interactors Detail
Experiments performed 8 experiments Detail
nullKeywords PDCD5(1-26), solution structure