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A novel cGUUAg tetraloop structure with a conserved yYNMGg-type backbone conformation from cloverleaf 1 of bovine enterovirus 1 RNA

Authors

Ihle, Y., Ohlenschlager, O., Duchardt, E., Ramachandran, R., Gorlach, M.

Assembly

D-loop from cloverleaf 1 of bovine enterovirus 1 RNA

Entity

1. D-loop from cloverleaf 1 of bovine enterovirus 1 RNA (polymer, Thiol state: not present), 18 monomers, 5828.422 Da Detail

GGCGUUCGUU AGAACGUC

Formula weight

5828.422 Da

Source organism

Enterovirus E

Exptl. method

NMR

Data set

assigned_chemical_shifts, coupling_constants

Chem. Shift Complete1

Sequence coverage: 100.0 %, Completeness: 97.3 %, Completeness (bb): 98.1 % Detail

Polymer type: polyribonucleotide

	Total	¹³C	¹⁵N	³¹P
All	97.3 % (145 of 149)	100.0 % (120 of 120)	81.8 % (9 of 11)	88.9 % (16 of 18)
Suger, PO4	98.1 % (106 of 108)	100.0 % (90 of 90)		88.9 % (16 of 18)
Nucleobase	95.1 % (39 of 41)	100.0 % (30 of 30)	81.8 % (9 of 11)
Aromatic	95.1 % (39 of 41)	100.0 % (30 of 30)	81.8 % (9 of 11)

1. D-loop from cloverleaf 1 of bovine enterovirus 1 RNA

GGCGUUCGUU AGAACGUC

Show sample condition

Sample #1

Pressure 1 atm, Temperature 298 (±1) K, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, Temperature 298 (±1) K, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, Temperature 298 (±1) K, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

Chem. Shift Complete2

Sequence coverage: 100.0 %, Completeness: 71.5 %, Completeness (bb): 72.2 % Detail

Polymer type: polyribonucleotide

	Total	¹³C	¹⁵N	³¹P
All	71.5 % (213 of 298)	74.6 % (179 of 240)	81.8 % (18 of 22)	44.4 % (16 of 36)
Suger, PO4	72.2 % (156 of 216)	77.8 % (140 of 180)		44.4 % (16 of 36)
Nucleobase	69.5 % (57 of 82)	65.0 % (39 of 60)	81.8 % (18 of 22)
Aromatic	69.5 % (57 of 82)	65.0 % (39 of 60)	81.8 % (18 of 22)

1. D-loop from cloverleaf 1 of bovine enterovirus 1 RNA

GGCGUUCGUU AGAACGUC

Show sample condition

Sample #1

Pressure 1 atm, Temperature 283 (±1) K, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, Temperature 283 (±1) K, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, Temperature 283 (±1) K, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

Coupling constant

17 J values in 1 lists
Pressure 1 atm, Temperature 298 (±1) K, pH 6.2 (±0.2) Detail

Release date

2005-04-18

Citation

A novel cGUUAg tetraloop structure with a conserved yYNMGg-type backbone conformation from cloverleaf 1 of bovine enterovirus 1 RNA
Ihle, Y., Ohlenschlager, O., Hafner, S., Duchardt, E., Zacharias, M., Seitz, S., Zell, R., Ramachandran, R., Gorlach, M.
Nucleic Acids Res. (2005), 33, 2003-2011, PubMed 15814817 , DOI 10.1093/nar/gki501 , Abstract

Related entities 1. D-loop from cloverleaf 1 of bovine enterovirus 1 RNA, : 1 entities Detail

Experiments performed 17 experiments Detail

1 (1H,15N)-HSQC

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

2 (1H,15N)-CPMG-NOESY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

3 (1H,1H)-H5(C5C4N)H

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

4 (1H,1H)-HCCNH-TOCSY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

5 (1H,1H)-HCCH-TOCSY (A)

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

6 (1H,1H)-HCCH-COSY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

7 (1H,15N)-2bond-HSQC

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

8 (1H,13C)-H(N)CO

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

9 (1H,13C)-HSQC

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

10 3D (1H,1H,13C)-HCCH-COSY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

11 3D (1H,1H,13C)-HCCH-TOCSY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

12 (1H,15N)-HCN

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

13 3D (1H,1H,13C)-NOESY-HSQC

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

14 (1H,31P)-HCP-CCH-TOCSY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

15 (1H,1H)-NOESY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

16 HNN-COSY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

17 (1H,13C)-HCCH-E.COSY

Instrument

#1 Model Varian INOVA (750 MHz)

#2 Model Varian INOVA (600 MHz)

Sample #1

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
1	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-15N]	1.0 mM
2	H2O		90 %
3	D2O		10 %
4	KH2PO4/K2HPO4		10 mM
5	KCl		40 mM
6	EDTA		0.2 mM

Sample #2

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
7	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
8	H2O		90 %
9	D2O		10 %
10	KH2PO4/K2HPO4		10 mM
11	KCl		40 mM
12	EDTA		0.2 mM

Sample #3

Pressure 1 atm, pH 6.2 (±0.2)

#	Name	Isotope labeling	Concentration
13	D-loop from cloverleaf 1 of bovine enterovirus 1 RNA	[U-13C; U-15N]	0.9 mM
14	D2O		99.99 %
15	KH2PO4/K2HPO4		10 mM
16	KCl		40 mM
17	EDTA		0.2 mM

nullKeywords A-form helix, cGUUAg RNA tetraloop, cUNCGg-type backbone conformation

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BMRB: 6562

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Related entities 1. D-loop from cloverleaf 1 of bovine enterovirus 1 RNA, : 1 entities Detail

Experiments performed 17 experiments Detail

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