BMRB: 6774

1H and Calpha assignments for bombinin H2

Authors

Zangger, K.

Assembly

Bombinin H2

Entity

1. Bombinin H2 (polymer, Thiol state: not present), 20 monomers, 1918.411 Da Detail

IIGPVLGLVG SALGGLLKKI

Formula weight

1918.411 Da

Source organism

Bombina variegata

Exptl. method

NMR

Refine. method

simulated annealing

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 44.7 %, Completeness (bb): 55.6 % Detail

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Polymer type: polypeptide(L)

	Total	1H	13C
All	44.7 % (92 of 206)	65.2 % (75 of 115)	18.7 % (17 of 91)
Backbone	55.6 % (55 of 99)	86.4 % (38 of 44)	30.9 % (17 of 55)
Sidechain	31.1 % (38 of 122)	52.1 % (37 of 71)	2.0 % (1 of 51)
Methyl	21.4 % (9 of 42)	42.9 % (9 of 21)	0.0 % (0 of 21)

1. Bombinin H2

IIGPVLGLVG SALGGLLKKI

Show sample condition

Sample

Temperature 298 (±1) K, pH 5.0 (±0.2), Details Bombinin H2 in DPC micelles

#	Name	Isotope labeling	Type	Concentration
1	Bombinin H2		protein	3 mM
2	Dodecylphosphocholine (DPC)		lipid	100 mM
3	KPi		buffer	50 mM
4	NaN3		antimicrobial agent	0.02 %

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Calculated from 20 models in PDB: 2AP7, Strand ID: A Detail

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Release date

2007-03-26

Citation

Structures of the glycine-rich diastereomeric peptides bombinin H2 and H4
Zangger, K., Gossler, R., Khatai, L., Lohner, K., Jilek, A.
Toxicon. (2008), 52, 246-254, PubMed 18586045 , DOI 10.1016/j.toxicon.2008.05.011 , Abstract

Related entities 1. Bombinin H2, : 1 : 3 : 19 : 1 : 31 entities Detail

Experiments performed 3 experiments Detail