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BMRB: 6910

2FE0

1H,13C,15N chemical shift assignment for SMP-1 (Small Myrisoylated Protein-1) from Leishmania

Authors

Gooley, P.R., Mertens, H.D. T., Tull, D., McConville, M.J.

Assembly

SMP-1

Entity

1. SMP-1 (polymer, Thiol state: all free), 131 monomers, 14988.66 Da Detail

MGCGASSENS SVTYVNGRPT FVGEEVTKGF EKDNGLLFRI VNKKKKQWAY YNDTTQYEMH VLVTFNEDCD IKALGKTKLE QQENGEWVAS VVVYPCETEM FIEGRVNGFK SKMDALPLSE EYRQHQAEKD K

Formula weight

14988.66 Da

Source organism

Leishmania major

Exptl. method

Refine. method

torsion angle dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 83.1 %, Completeness (bb): 84.1 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	83.1 % (1287 of 1548)	87.1 % (705 of 809)	74.5 % (443 of 595)	96.5 % (139 of 144)
Backbone	84.1 % (656 of 780)	96.7 % (260 of 269)	70.8 % (271 of 383)	97.7 % (125 of 128)
Sidechain	84.5 % (751 of 889)	82.4 % (445 of 540)	87.7 % (292 of 333)	87.5 % (14 of 16)
Aromatic	71.4 % (100 of 140)	87.1 % (61 of 70)	54.4 % (37 of 68)	100.0 % (2 of 2)
Methyl	97.4 % (113 of 116)	98.3 % (57 of 58)	96.6 % (56 of 58)

1. SMP-1

MGCGASSENS SVTYVNGRPT FVGEEVTKGF EKDNGLLFRI VNKKKKQWAY YNDTTQYEMH VLVTFNEDCD IKALGKTKLE QQENGEWVAS VVVYPCETEM FIEGRVNGFK SKMDALPLSE EYRQHQAEKD K

Show sample condition

Sample

Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

LACS Plot; CA

Referencing offset: 0.01 ppm, Outliers: 1 Detail

LACS Plot; CB

Referencing offset: 0.01 ppm, Outliers: 1 Detail

LACS Plot; HA

Referencing offset: -0.11 ppm, Outliers: 1 Detail

Protein Blocks Logo

Calculated from 24 models in PDB: 2FE0, Strand ID: A Detail

Release date

2006-04-13

Citation

1H, 13C and 15N resonance assignments of SMP-1: a small myristoylated protein from Leishmania major
Gooley, P.R., Mertens, H.D. T., Tull, D., McConville, M.J.
J. Biomol. NMR (2006), 36 Suppl 1, 26-26, PubMed 16601858 , DOI 10.1007/s10858-006-0010-1 , Abstract

Related entities 1. SMP-1, : 1 : 42 entities Detail

Experiments performed 12 experiments Detail

1 CBCA(CO)NH

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

2 HNCACB

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

3 H(CCO)NH

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

4 C(CO)NH

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

5 HBHA(CO)NH

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

6 HCCH-TOCSY

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

7 HNHA

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

8 HNHB

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

9 (HB)CB(CGCD)HD

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

10 1H-TOCSY-relayed ct-(13C,1H)HMQC

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

11 15N-HSQC

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

12 13C-HSQC

Instrument

Varian Inova - 500 MHz 1H,13C,15N probe with single z-axis gradient

Sample

State isotropic, Temperature 298 (±0.1) K, pH 6.8 (±0.05)

#	Name	Isotope labeling	Type	Concentration
1	SMP-1	[U-13C; U-15N]	protein	1 mM
2	Dithiothreitol		buffer	5 mM
3	Sodium Phosphate		buffer	50 mM
4	H2O		solvent	90 %
5	D2O		solvent	10 %

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