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1H, 13C, and 15N NMR Assignment of the Master-Rep Protein Nuclease Domain (2-95) from the Faba Bean Necrotic Yellows Virus
Authors
Vega-Rocha, S., Campos-Olivas, R.
Assembly
FBNYV M-Rep (2-95)
Entity
1. FBNYV M-Rep (2-95) (polymer, Thiol state: all free), 94 monomers, 10825.23 Da Detail

ARQVICWCFT LNNPLSPLSL HDSMKYLVYQ TEQGEAGNIH FQGYIEMKKR TSLAGMKKLI PGAHFEKRRG TQGEARAYSM KEDTRLEGPW EYGE


Formula weight
10825.23 Da
Source organism
Faba bean necrotic yellows virus
Exptl. method
NMR
Refine. method
30 conformers calculated using simulated annealing in torsion angle space with CYANA 2.1 (Models 2-31) and average structure after CYANA variable target function minimisation (Model 1)
Data set
assigned_chemical_shifts, coupling_constants, heteronucl_NOEs
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 95.7 %, Completeness (bb): 96.8 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All95.7 % (1076 of 1124)95.8 % (567 of 592)95.8 % (414 of 432)95.0 % (95 of 100)
Backbone96.8 % (538 of 556)94.3 % (182 of 193)99.3 % (271 of 273)94.4 % (85 of 90)
Sidechain95.4 % (623 of 653)96.5 % (385 of 399)93.4 % (228 of 244)100.0 % (10 of 10)
Aromatic84.9 % (90 of 106)100.0 % (53 of 53)68.6 % (35 of 51)100.0 % (2 of 2)
Methyl97.4 % (76 of 78)94.9 % (37 of 39)100.0 % (39 of 39)

1. FBNYV M-Rep (2-95)

ARQVICWCFT LNNPLSPLSL HDSMKYLVYQ TEQGEAGNIH FQGYIEMKKR TSLAGMKKLI PGAHFEKRRG TQGEARAYSM KEDTRLEGPW EYGE

Sample #1

Temperature 293 (±0.5) K, pH 6.6 (±0.1)


#NameIsotope labelingTypeConcentration
1(2-95) M-Rep FBNYV[U-10% 13C; U-15N]0.5 mM
2Sodium phosphate20 mM
3NaCl600 mM
4DTT1 mM
5D2O8 %
Sample #2

Temperature 293 (±0.5) K, pH 6.6 (±0.1)


#NameIsotope labelingTypeConcentration
6(2-95) M-Rep FBNYV[U-13C; U-15N]0.5 mM
7Sodium phosphate20 mM
8NaCl600 mM
9DTT1 mM
10D2O8 %
Sample #3

Temperature 293 (±0.5) K, pH 6.6 (±0.1)


#NameIsotope labelingTypeConcentration
112-95 Rep FBNYV[U-13C; U-15N]0.5 mM
12Sodium phosphate20 mM
13NaCl600 mM
14DTT1 mM
15D2O100 %

LACS Plot; CA
Referencing offset: -0.31 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.31 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: -0.01 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: 0.22 ppm, Outliers: 3 Detail
Protein Blocks Logo
Calculated from 31 models in PDB: 2HWT, Strand ID: A Detail


Heteronucl. NOE
59 NOE values in 1 lists
Value type relative intensities, Field strength (1H) 600 MHz, Temperature 293 (±0.5) K, pH 6.6 (±0.1) Detail
Coupling constant
70 J values in 1 lists
Temperature 293 (±0.5) K, pH 6.6 (±0.1) Detail
Release date
2006-11-12
Citation
1H, 13C, and 15N NMR assignment of the master Rep protein nuclease domain from the nanovirus FBNYV
Vega-Rocha, S., Gronenborn, A.M., Gronenborn, B., Campos-Olivas, R.
J. Biomol. NMR (2007), 38, 169-169, PubMed 17043745 , DOI 10.1007/s10858-006-9085-y ,
Entries sharing articles BMRB: 1 entries Detail
  BMRB: 7218 released on 2006-10-29
    Title 1H, 13C and 15N assignment of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus
Related entities 1. FBNYV M-Rep (2-95), : 1 : 2 : 1 : 23 entities Detail
Experiments performed 17 experiments Detail
nullKeywords M-Rep(2-95) of FBNYV