BMRB: 7180

NMR structure of UPF0301 PROTEIN SO3346 from Shewanella oneidensis: Northeast Structural Genomics Consortium target SOR39

Authors

Singarapu, K.K., Liu, G., Eletsky, A., Xu, D., Sukumaran, D.K., Mei, J., Xiao, R., Cunningham, K., Ma, L.C., Ritu, S., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T.

Assembly

UPF0301 protein SO3346

Entity

1. UPF0301 protein SO3346 (polymer, Thiol state: all free), 195 monomers, 21772.18 Da Detail

MESLQNHFLI AMPSLDDTFF ERTVIYLCEH DEKGAMGLVI NKPLGIEVNS LLEQMDLPTE QVSADLAMGS QVLMGGPVSQ DRGFVLHTSQ PYWANSTELG SGLMLTTSRD VLTAIGSKRS PDKFLVALGY AGWSKNQLEQ ELADNSWLTI PADHALLFDI NHEDRWQQAS RSLGFEAWQL STQAGHALEH HHHHH

Formula weight

21772.18 Da

Source organism

Shewanella oneidensis

Exptl. method

NMR

Refine. method

distance geometry, simulated annealing, molecular dynamics, torsion angle dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 83.6 %, Completeness: 72.6 %, Completeness (bb): 69.6 % Detail

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Polymer type: polypeptide(L)

	Total	1H	13C	15N
All	72.6 % (1623 of 2236)	78.3 % (900 of 1150)	65.0 % (568 of 874)	73.1 % (155 of 212)
Backbone	69.6 % (804 of 1156)	80.4 % (319 of 397)	59.5 % (340 of 571)	77.1 % (145 of 188)
Sidechain	76.8 % (968 of 1261)	77.2 % (581 of 753)	77.9 % (377 of 484)	41.7 % (10 of 24)
Aromatic	60.9 % (123 of 202)	66.3 % (67 of 101)	54.2 % (52 of 96)	80.0 % (4 of 5)
Methyl	92.7 % (202 of 218)	92.7 % (101 of 109)	92.7 % (101 of 109)

1. UPF0301 protein SO3346

MESLQNHFLI AMPSLDDTFF ERTVIYLCEH DEKGAMGLVI NKPLGIEVNS LLEQMDLPTE QVSADLAMGS QVLMGGPVSQ DRGFVLHTSQ PYWANSTELG SGLMLTTSRD VLTAIGSKRS PDKFLVALGY AGWSKNQLEQ ELADNSWLTI PADHALLFDI NHEDRWQQAS RSLGFEAWQL STQAGHALEH HHHHH

Show sample condition

Sample

Pressure 1 atm, Temperature 298 K, pH 6.5

#	Name	Isotope labeling	Type	Concentration
1	UPF0301 protein SO3346
2	Arginine			50 mM
3	DTT			10 mM
4	Bis Tris			50 mM
5	H2O			95 %
6	D2O			5 %

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Protein Blocks Logo

Calculated from 20 models in PDB: 2GZO, Strand ID: A Detail

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Release date

2007-11-20

Citation

NMR structure of UPF0301 PROTEIN SO3346 from Shewanella oneidensis: Northeast Structural Genomics Consortium target SOR39
Singarapu, K.K., Liu, G., Eletsky, A., Xu, D., Sukumaran, D.K., Mei, J., Xiao, R., Cunningham, K., Ma, L.C., Ritu, S., Acton, T.B., Rost, B., Montelione, G.T., Szyperski, T.

Related entities 1. UPF0301 protein SO3346, : 1 : 1 : 111 entities Detail

Experiments performed 7 experiments Detail