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1H, 13C, and 15N Chemical Shift Assignments for Transmembrane Segment of ErbB4
Authors
Mineev, K.S., Bocharov, E.V., Maslennikov, I.V., Goncharuk, M.V., Arseniev, A.S.
Assembly
ErbB4 TM dimer
Entity
1. ErbB4 TM dimer (polymer, Thiol state: not present), 44 monomers, 4760.756 Da Detail

STLPQHARTP LIAAGVIGGL FILVIVGLTF AVYVRRKSIK KKRA


Formula weight
4760.756 Da
Source organism
Homo sapiens
Exptl. method
NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts, coupling_constants, heteronucl_T1_relaxation, heteronucl_T2_relaxation
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 88.0 %, Completeness (bb): 94.6 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All88.0 % (464 of 527)90.1 % (245 of 272)84.4 % (179 of 212)93.0 % (40 of 43)
Backbone94.6 % (246 of 260)97.8 % (88 of 90)92.2 % (118 of 128)95.2 % (40 of 42)
Sidechain83.4 % (256 of 307)86.3 % (157 of 182)79.8 % (99 of 124) 0.0 % (0 of 1)
Aromatic12.5 % (4 of 32)25.0 % (4 of 16) 0.0 % (0 of 16)
Methyl92.1 % (70 of 76)94.7 % (36 of 38)89.5 % (34 of 38)

1. ErbB4 TM

STLPQHARTP LIAAGVIGGL FILVIVGLTF AVYVRRKSIK KKRA

Sample

Temperature 313 (±0.5) K, pH 5.0 (±0.1), Details DMPC:10 DHPC:40 ErbB4TM15N: 1.2


#NameIsotope labelingTypeConcentration
1ErbB4 TM[U-15N]2.4 (±0.3) mM
2DMPC[U-2H]19 (±1.0) mM
3DHPC[U-2H]77 (±1.0) mM

Protein Blocks Logo
Calculated from 20 models in PDB: 2LCX, Strand ID: A, B Detail


Heteronucl. T1
36 T1 values in 1 lists
Coherence Sz, Field strength (1H) 600 MHz, Temperature 313 (±0.5) K, pH 5.0 (±0.1) Detail
Heteronucl. T2
34 T2 values in 1 lists
Coherence S(+,-), Field strength (1H) 600 MHz, Temperature 313 (±0.5) K, pH 5.0 (±0.1) Detail
Heteronucl. T1/T2
34 T1/T2 values in 1 lists
Field strength (1H) 600 MHz, Temperature 313 (±0.5) K, pH 5.0 (±0.1) Detail
Coupling constant
37 J values in 1 lists
Temperature 313 (±0.5) K, pH 5.0 (±0.1) Detail
Release date
2007-01-08
Citation
Spatial structure of the dimeric transmembrane domain of the growth factor receptor ErbB2 presumably corresponding to the receptor active state
Bocharov, E.V., Mineev, K.S., Volynsky, P.E., Ermolyuk, Y.S., Tkach, E.N., Sobol, A.G., Chupin, V.V., Kirpichnikov, M.P., Efremov, R.G., Arseniev, A.S.
J. Biol. Chem. (2008), 283, 6950-6956, PubMed 18178548 , DOI 10.1074/jbc.M709202200 ,
Related entities 1. ErbB4 TM dimer, : 1 : 3 : 44 entities Detail
Interaction partners 1. ErbB4 TM dimer, : 23 interactors Detail
Experiments performed 13 experiments Detail
nullKeywords dimer, ErbB4, human, kinase, protein, transmembrane