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BMRB: 11001

2RLI

Solution structure of Cu(I) loaded human Sco2

Authors

Banci, L., Bertini, I., Ciofi-baffoni, S., Gerothanassis, I.P., Leontari, I., Martinelli, M., Wang, S.

Assembly

Cu(I)HSco2

Entity

1. HSco2 (polymer, Thiol state: free and other bound), 170 monomers, 19410.54 Da Detail

SFTGQGDFHL LDHRGRARCK ADFRGQWVLM YFGFTHCPDI CPDELEKLVQ VVRQLEAEPG LPPVQPVFIT VDPERDDVEA MARYVQDFHP RLLGLTGSTK QVAQASHSYR VYYNAGPKDE DQDYIVDHSI AIYLLNPDGL FTDYYGRSRS AEQISDSVRR HMAAFRSVLS

2. CU1 (non-polymer), 63.546 Da

Total weight

19474.086 Da

Max. entity weight

19410.54 Da

Entity Connection

na 2 Detail

ID	Type	Value order	Atom ID 1	Atom ID 2
1	na	sing	2:CU11:CU1	1:CYS37:SG
2	na	sing	2:CU11:CU1	1:CYS41:SG

Source organism

Homo sapiens

Exptl. method

solution NMR

Refine. method

molecular dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 99.4 %, Completeness: 89.8 %, Completeness (bb): 97.4 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	89.8 % (1774 of 1975)	92.0 % (943 of 1025)	85.2 % (662 of 777)	97.7 % (169 of 173)
Backbone	97.4 % (974 of 1000)	97.7 % (333 of 341)	97.0 % (484 of 499)	98.1 % (157 of 160)
Sidechain	84.4 % (957 of 1134)	89.2 % (610 of 684)	76.7 % (335 of 437)	92.3 % (12 of 13)
Aromatic	36.1 % (73 of 202)	66.3 % (67 of 101)	5.0 % (5 of 100)	100.0 % (1 of 1)
Methyl	100.0 % (172 of 172)	100.0 % (86 of 86)	100.0 % (86 of 86)

1. HSco2

SFTGQGDFHL LDHRGRARCK ADFRGQWVLM YFGFTHCPDI CPDELEKLVQ VVRQLEAEPG LPPVQPVFIT VDPERDDVEA MARYVQDFHP RLLGLTGSTK QVAQASHSYR VYYNAGPKDE DQDYIVDHSI AIYLLNPDGL FTDYYGRSRS AEQISDSVRR HMAAFRSVLS

Show sample condition

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 308 K, pH 7.2

#	Name	Isotope labeling	Type	Concentration
1	Cu(I)HSco2	[U-100% 13C; U-100% 15N]		0.8 (±0.1) mM

Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 308 K, pH 7.2

#	Name	Isotope labeling	Type	Concentration
2	Cu(I)HSco2	[U-100% 15N]		0.8 (±0.1) mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹³C	dioxane	carbon	69.4 ppm	internal	direct	1.0
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
¹⁵N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

Referencing offset: 3.12 ppm, Outliers: 2 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹³C	dioxane	carbon	69.4 ppm	internal	direct	1.0
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
¹⁵N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

Referencing offset: 3.12 ppm, Outliers: 2 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹³C	dioxane	carbon	69.4 ppm	internal	direct	1.0
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
¹⁵N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

Referencing offset: -0.04 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹³C	dioxane	carbon	69.4 ppm	internal	direct	1.0
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0
¹⁵N	DSS	methyl protons	0.0 ppm	null	indirect	0.1013291

Referencing offset: 2.84 ppm, Outliers: 2 Detail

Protein Blocks Logo

Calculated from 31 models in PDB: 2RLI, Strand ID: A Detail

Release date

2008-03-12

Citation

A structural characterization of human SCO2
Banci, L., Bertini, I., Ciofi-baffoni, S., Gerothanassis, I.P., Leontari, I., Martinelli, M., Wang, S.
Structure (2007), 15, 1132-1140, PubMed 17850752 , DOI 10.1016/j.str.2007.07.011 , Abstract

Entries sharing articles Swiss-Prot: 1 entries Detail

Swiss-Prot: O43819 released on 2000-05-30
Title SCO2_HUMAN Entity Protein SCO2 homolog, mitochondrial

Related entities 1. HSco2, : 1 : 2 : 73 entities Detail

Interaction partners 1. HSco2, : 16 interactors Detail

More details for 16 interactors identified by 11 citations

Experiments performed 10 experiments Detail

1 2D 1H-15N HSQC