Search

Structure of antimicrobial peptide anoplin in DPC micelles
Authors
Uggerhoej, L.E., Poulsen, T.J., Wimmer, R.
Assembly
anoplin
Entity
1. anoplin (polymer, Thiol state: not present), 11 monomers, 1152.496 Da Detail

GLLKRIKTLL X


Formula weight
1152.496 Da
Source organism
Anoplius samariensis
Exptl. method
solution NMR
Refine. method
molecular dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 90.9 %, Completeness: 83.1 %, Completeness (bb): 78.0 % Detail

Polymer type: polypeptide(L)

Total1H13C
All83.1 % (103 of 124)93.0 % (66 of 71)69.8 % (37 of 53)
Backbone78.0 % (39 of 50)90.5 % (19 of 21)69.0 % (20 of 29)
Sidechain88.0 % (73 of 83)94.0 % (47 of 50)78.8 % (26 of 33)
Methyl77.3 % (17 of 22)100.0 % (11 of 11)54.5 % (6 of 11)

1. anoplin

GLLKRIKTLL X

Sample

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 310.1 K, pH 6.5


#NameIsotope labelingTypeConcentration
1anoplinnatural abundanceprotein3 mM
2DPC[U-98% 2H]150 mM
3potassium phosphatenatural abundancebuffer10 mM
4sodium azidenatural abundance2 mM
5H2Onatural abundancesolvent95 %
6D2O[U-99% 2H]solvent5 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2MJQ, Strand ID: A Detail


Release date
2014-11-30
Citation
Rational Design of alpha-helical antimicrobial peptides: DOs and DON'Ts
Uggerhoej, L.E., Poulsen, T.J., Munk, J., Fredborg, M., Sondergaard, T.E., Frimodt-Moeller, N., Hansen, P.R., Wimmer, R.
ChemBioChem
Experiments performed 4 experiments Detail
NMR combined restraints 4 contents Detail