Search

Structure of anoplin mutant R5W in DPC micelles
Authors
Uggerhoej, L.E., Poulsen, T.J., Wimmer, R.
Assembly
anoplin
Entity
1. anoplin (polymer, Thiol state: not present), 11 monomers, 1182.520 Da Detail

GLLKWIKTLL X


Formula weight
1182.52 Da
Source organism
Anoplius samariensis
Exptl. method
solution NMR
Refine. method
molecular dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 90.9 %, Completeness: 82.8 %, Completeness (bb): 76.0 % Detail

Polymer type: polypeptide(L)

Total1H13C
All82.8 % (106 of 128)95.8 % (69 of 72)66.1 % (37 of 56)
Backbone76.0 % (38 of 50)90.5 % (19 of 21)65.5 % (19 of 29)
Sidechain88.5 % (77 of 87)98.0 % (50 of 51)75.0 % (27 of 36)
Aromatic54.5 % (6 of 11)100.0 % (6 of 6) 0.0 % (0 of 5)
Methyl90.9 % (20 of 22)100.0 % (11 of 11)81.8 % (9 of 11)

1. anoplin

GLLKWIKTLL X

Sample

Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 310.1 K, pH 6.5


#NameIsotope labelingTypeConcentration
1anoplinnatural abundanceprotein3 mM
2DPC[U-98% 2H]150 mM
3potassium phosphatenatural abundancebuffer10 mM
4sodium azidenatural abundance2 mM
5H2Onatural abundancesolvent95 %
6D2O[U-99% 2H]solvent5 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2MJR, Strand ID: A Detail


Release date
2014-11-30
Citation
Rational Design of alpha-helical antimicrobial peptides: DOs and DON'Ts
Uggerhoej, L.E., Poulsen, T.J., Munk, J., Fredborg, M., Sondergaard, T.E., Frimodt-Moeller, N., Hansen, P.R., Wimmer, R.
ChemBioChem
Experiments performed 4 experiments Detail
NMR combined restraints 4 contents Detail