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URN1 FF domain yeast
Authors
Bonet, R., Ramirez-Espain, X., Macias, M.J.
Assembly
FF
Entity
1. FF (polymer, Thiol state: all free), 58 monomers, 7117.804 Da Detail

AMGDIDERNI FFELFDRYKL DKFSTWSLQS KKIENDPDFY KIRDDTVRES LFEEWCGE


Formula weight
7117.804 Da
Source organism
Saccharomyces cerevisiae
Exptl. method
solution NMR
Refine. method
torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 92.1 %, Completeness (bb): 98.3 % Detail

Polymer type: polypeptide(L)

Total1H
All92.1 % (352 of 382)92.1 % (352 of 382)
Backbone98.3 % (115 of 117)98.3 % (115 of 117)
Sidechain89.4 % (237 of 265)89.4 % (237 of 265)
Aromatic88.0 % (44 of 50)88.0 % (44 of 50)
Methyl100.0 % (21 of 21)100.0 % (21 of 21)

1. FF

AMGDIDERNI FFELFDRYKL DKFSTWSLQS KKIENDPDFY KIRDDTVRES LFEEWCGE

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 285 (±1) K, pH 5.8 (±0.2), Details unlabeled


#NameIsotope labelingTypeConcentration
1FFnatural abundance0.5 mM
2sodium phosphatenatural abundance20 mM
3sodium chloridenatural abundance130 mM
4sodium azidenatural abundance0.03 %
5D2O10 %
6H2Onatural abundance90 %
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 285 (±1) K, pH 5.8 (±0.2), Details Nlabeled


#NameIsotope labelingTypeConcentration
7FF[U-100% 15N]0.5 mM
8sodium phosphatenatural abundance20 mM
9sodium chloridenatural abundance130 mM
10sodium azidenatural abundance0.03 %
11D2O10 %
12H2Onatural abundance90 %
Sample #3

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 285 (±1) K, pH 5.8 (±0.2), Details Clabeled


#NameIsotope labelingTypeConcentration
13FF[U-100% 13C; U-100% 15N]0.5 mM
14sodium phosphatenatural abundance20 mM
15sodium chloridenatural abundance130 mM
16sodium azidenatural abundance0.03 %
17D2O10 %
18H2Onatural abundance90 %

Protein Blocks Logo
Calculated from 15 models in PDB: 2JUC, Strand ID: A Detail


Release date
2008-06-25
Citation
Solution structure of the yeast URN1 splicing factor FF domain: comparative analysis of charge distributions in FF domain structures-FFs and SURPs, two domains with a similar fold
Bonet, R., Ramirez-Espain, X., Macias, M.J.
Proteins (2008), 73, 1001-1009, PubMed 18536009 , DOI 10.1002/prot.22127 ,
Entries sharing articles Swiss-Prot: 1 entries Detail
  Swiss-Prot: Q06525 released on 2006-06-27
    Title URN1_YEAST Entity Pre-mRNA-splicing factor URN1
Related entities 1. FF, : 1 : 2 : 11 entities Detail
Interaction partners 1. FF, : 13 interactors Detail
Experiments performed 4 experiments Detail
NMR combined restraints 4 contents Detail
Keywords FF, helical bundle, NMR, solution