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BMRB: 15761

2K1O

Chemical shift assignments for JHP0511 (HP0564) from Helicobacter pylori.

Authors

Borin, B.N.

Assembly

JHP0511

Entity

1. JHP0511 (polymer, Thiol state: not present), 66 monomers, 7782.602 × 2 Da Detail

MRGSHHHHHH GSKRNFSVTF YLSKEEHDVL RRLADEEVES VNSFVKRHIL KTIIYKKGTN QDSSIN

Total weight

15565.204 Da

Max. entity weight

7782.602 Da

Source organism

Helicobacter pylori

Exptl. method

solution NMR

Refine. method

torsion angle dynamics, energy minimization

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 81.8 %, Completeness: 77.0 %, Completeness (bb): 80.8 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	77.0 % (610 of 792)	74.4 % (308 of 414)	79.8 % (245 of 307)	80.3 % (57 of 71)
Backbone	80.8 % (320 of 396)	80.0 % (108 of 135)	81.0 % (158 of 195)	81.8 % (54 of 66)
Sidechain	74.7 % (343 of 459)	71.7 % (200 of 279)	80.0 % (140 of 175)	60.0 % (3 of 5)
Aromatic	65.4 % (51 of 78)	69.2 % (27 of 39)	61.5 % (24 of 39)
Methyl	98.3 % (59 of 60)	100.0 % (30 of 30)	96.7 % (29 of 30)

1. JHP0511

MRGSHHHHHH GSKRNFSVTF YLSKEEHDVL RRLADEEVES VNSFVKRHIL KTIIYKKGTN QDSSIN

Show sample condition

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 4

#	Name	Isotope labeling	Concentration
1	JHP0511	natural abundance	1 mM
2	potassium phosphate	natural abundance	50 mM
3	D2O		10 %
4	H2O	natural abundance	90 %

Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 4

#	Name	Isotope labeling	Concentration
5	JHP0511	[U-100% 15N]	1 mM
6	potassium phosphate	natural abundance	50 mM
7	D2O		10 %
8	H2O	natural abundance	90 %

Sample #3

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 4

#	Name	Isotope labeling	Concentration
9	JHP0511	[U-100% 13C; U-100% 15N]	1 mM
10	potassium phosphate	natural abundance	50 mM
11	D2O		10 %
12	H2O	natural abundance	90 %

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: -0.18 ppm, Outliers: 2 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: -0.18 ppm, Outliers: 2 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: -0.01 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	DSS	methyl protons	null	indirect	0.2514495
¹H	DSS	methyl protons	internal	direct	1.0
¹⁵N	DSS	methyl protons	null	indirect	0.1013291

Referencing offset: -0.01 ppm, Outliers: 3 Detail

Protein Blocks Logo

Calculated from 20 models in PDB: 2K1O, Strand ID: A, B Detail

Release date

2008-07-27

Citation

Structure of HP0564 from Helicobacter pylori identifies it as a new transcriptional regulator
Borin, B.N., Krezel, A.M.
Proteins (2008), 73, 265-268, PubMed 18623065 , DOI 10.1002/prot.22159 , Abstract

Related entities 1. JHP0511, : 1 : 1 entities Detail

Experiments performed 8 experiments Detail

1 2D 1H-15N HSQC