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NMR structure of the N-terminal domain of kindlin1
Authors
Goult, B.T.
Assembly
F0
Entity
1. F0 (polymer, Thiol state: all free), 102 monomers, 11655.16 Da Detail

GIDPFTMLSS GDLTSASWEL VVRVDHANGE QQTEITLRVS GDLHIGGVML KLVEQMNIAQ DWSDYALWWE QKRCWLLKTH WTLDKCGVQA DANLLFTPQH KM


Formula weight
11655.16 Da
Source organism
Mus musculus
Exptl. method
solution NMR
Refine. method
simulated annealing, molecular dynamics, torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 95.0 %, Completeness (bb): 97.0 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All95.0 % (1142 of 1202)95.5 % (590 of 618)93.6 % (438 of 468)98.3 % (114 of 116)
Backbone97.0 % (590 of 608)98.1 % (205 of 209)96.0 % (287 of 299)98.0 % (98 of 100)
Sidechain92.5 % (637 of 689)92.7 % (379 of 409)91.7 % (242 of 264)100.0 % (16 of 16)
Aromatic84.5 % (98 of 116)84.5 % (49 of 58)82.7 % (43 of 52)100.0 % (6 of 6)
Methyl96.7 % (118 of 122)96.7 % (59 of 61)96.7 % (59 of 61)

1. F0

GIDPFTMLSS GDLTSASWEL VVRVDHANGE QQTEITLRVS GDLHIGGVML KLVEQMNIAQ DWSDYALWWE QKRCWLLKTH WTLDKCGVQA DANLLFTPQH KM

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 (±0.1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
1F0[U-100% 15N]200 (±5.0) uM
2DTTnatural abundance2 (±0.1) mM
3sodium phosphatenatural abundance20 (±0.3) mM
4sodium chloridenatural abundance50 (±0.3) mM
5H2Onatural abundance90 %
6D2Onatural abundance10 %
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 (±0.1) K, pH 6.5 (±0.1)


#NameIsotope labelingTypeConcentration
7F0[U-100% 13C; U-100% 15N]200 (±5.0) uM
8DTTnatural abundance2 (±0.1) mM
9sodium phosphatenatural abundance20 (±0.3) mM
10sodium chloridenatural abundance50 (±0.3) mM
11H2Onatural abundance90 %
12D2Onatural abundance10 %

LACS Plot; CA
Referencing offset: 0.0 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: 0.0 ppm, Outliers: 1 Detail
LACS Plot; HA
Referencing offset: 0.02 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: 0.23 ppm, Outliers: 2 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2KMC, Strand ID: A Detail


Release date
2009-11-30
Citation
The structure of the N-terminus of kindlin-1: a domain important for alphaiibbeta3 integrin activation
Goult, B.T., Bouaouina, M., Harburger, D.S., Bate, N., Patel, B., Anthis, N.J., Campbell, I.D., Calderwood, D.A., Barsukov, I.L., Roberts, G.C., Critchley, D.R.
J. Mol. Biol. (2009), 394, 944-956, PubMed 19804783 , DOI 10.1016/j.jmb.2009.09.061 ,
Entries sharing articles Swiss-Prot: 2 entries Detail
  Swiss-Prot: P59113 released on 2002-12-06
    Title FERM1_MOUSE Entity Fermitin family homolog 1
  Swiss-Prot: Q9BQL6 released on 2002-12-06
    Title FERM1_HUMAN Entity Fermitin family homolog 1
Related entities 1. F0, : 1 : 2 : 35 entities Detail
Interaction partners 1. F0, : 2 interactors Detail
Experiments performed 8 experiments Detail
Chemical shift validation 3 contents Detail
Keywords adhesion, ilk, integrin, kindlin, migfilin, nmr, talin