Spatial structure of Lch-beta peptide from two-component lantibiotic system Lichenicidin VK21
ID | Type | Value order | Atom ID 1 | Atom ID 2 |
---|---|---|---|---|
1 | peptide | sing | 1:2KT1:O | 1:DBU2:N |
2 | peptide | sing | 1:DBU2:O | 1:PRO3:N |
3 | peptide | sing | 1:PRO3:O | 1:ALA4:N |
4 | peptide | sing | 1:ALA4:O | 1:DBU5:N |
5 | peptide | sing | 1:DBU5:O | 1:DBU6:N |
6 | peptide | sing | 1:DBU6:O | 1:DAL7:N |
7 | peptide | sing | 1:DAL7:O | 1:DHA8:N |
8 | peptide | sing | 1:ILE12:O | 1:DBU13:N |
9 | peptide | sing | 1:DBU13:O | 1:ALA14:N |
10 | peptide | sing | 1:VAL16:O | 1:DBU17:N |
11 | peptide | sing | 1:DBU17:O | 1:VAL18:N |
12 | peptide | sing | 1:VAL18:O | 1:DAL19:N |
13 | peptide | sing | 1:DAL19:O | 1:ALA20:N |
14 | peptide | sing | 1:PRO24:O | 1:ABA25:N |
15 | peptide | sing | 1:ABA25:O | 1:DBU26:N |
16 | peptide | sing | 1:DBU26:O | 1:LYS27:N |
17 | peptide | sing | 1:CYS28:O | 1:ABA29:N |
18 | peptide | sing | 1:ABA29:O | 1:SER30:N |
Polymer type: polypeptide(L)
Total | 1H | 13C | |
---|---|---|---|
All | 87.4 % (167 of 191) | 96.3 % (103 of 107) | 76.2 % (64 of 84) |
Backbone | 77.6 % (76 of 98) | 94.9 % (37 of 39) | 66.1 % (39 of 59) |
Sidechain | 98.2 % (110 of 112) | 97.1 % (66 of 68) | 100.0 % (44 of 44) |
Aromatic | 100.0 % (11 of 11) | 100.0 % (6 of 6) | 100.0 % (5 of 5) |
Methyl | 100.0 % (24 of 24) | 100.0 % (12 of 12) | 100.0 % (12 of 12) |
1. LchB
XXPAXXXXWT CIXAGVXVXA SLCPXXKCXS RCSolvent system methanol, Pressure 1 atm, Temperature 300 K, pH 3.5 (±0.1)
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | LchB | natural abundance | 0.5 mM | |
2 | methanol | [U-100% 2H] | 500 mg |