Helical hairpin structure of a novel antimicrobial peptide EcAMP1 from seeds of barnyard grass (Echinochloa crus-galli)
ID | Type | Value order | Atom ID 1 | Atom ID 2 |
---|---|---|---|---|
1 | disulfide | sing | 1:CYS7:SG | 1:CYS29:SG |
2 | disulfide | sing | 1:CYS11:SG | 1:CYS25:SG |
Polymer type: polypeptide(L)
Total | 1H | |
---|---|---|
All | 98.2 % (217 of 221) | 98.2 % (217 of 221) |
Backbone | 98.7 % (78 of 79) | 98.7 % (78 of 79) |
Sidechain | 97.9 % (139 of 142) | 97.9 % (139 of 142) |
Aromatic | 87.5 % (7 of 8) | 87.5 % (7 of 8) |
Methyl | 100.0 % (4 of 4) | 100.0 % (4 of 4) |
1. EcAMP1
GSGRGSCRSQ CMRRHEDEPW RVQECVSQCR RRRGGGDSolvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 293 K, pH 6.62
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | EcAMP1 | natural abundance | 0.7 mg/mL | |
2 | KOH | natural abundance | 10 mM | |
3 | H2O | natural abundance | 95 % | |
4 | D2O | natural abundance | 5 % |