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Solution NMR Structure of the eukaryotic RNA recognition motif, RRM1, from the heterogeneous nuclear ribonucleoprotein H from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR8614A
Authors
Ramelot, T.A., Yang, Y., Pederson, K., Shastry, R., Kohan, E., Janjua, H., Xiao, R., Acton, T.B., Everett, J.K., Prestegard, J.H., Montelione, G.T., Kennedy, M.A.
Assembly
HR8614A
Entity
1. HR8614A (polymer, Thiol state: all free), 108 monomers, 12151.40 Da Detail

SHMGGEGFVV KVRGLPWSCS ADEVQRFFSD CKIQNGAQGI RFIYTREGRP SGEAFVELES EDEVKLALKK DRETMGHRYV EVFKSNNVEM DWVLKHTGPN SPDTANDG


Formula weight
12151.4 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts, conformer_family_coord_set, representative_conformer, spectral_peak_list
Chem. Shift Complete
Sequence coverage: 99.1 %, Completeness: 96.5 %, Completeness (bb): 96.6 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All96.5 % (1196 of 1240)96.8 % (627 of 648)95.8 % (458 of 478)97.4 % (111 of 114)
Backbone96.6 % (618 of 640)96.9 % (216 of 223)96.2 % (301 of 313)97.1 % (101 of 104)
Sidechain96.6 % (673 of 697)96.7 % (411 of 425)96.2 % (252 of 262)100.0 % (10 of 10)
Aromatic89.3 % (100 of 112)91.1 % (51 of 56)87.0 % (47 of 54)100.0 % (2 of 2)
Methyl98.9 % (89 of 90)97.8 % (44 of 45)100.0 % (45 of 45)

1. HR8614A

SHMGGEGFVV KVRGLPWSCS ADEVQRFFSD CKIQNGAQGI RFIYTREGRP SGEAFVELES EDEVKLALKK DRETMGHRYV EVFKSNNVEM DWVLKHTGPN SPDTANDG

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 1.0 mM HR8614A.007, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1HR8614A.007[U-100% 13C; U-100% 15N]1.0 mM
2MESnatural abundance20 mM
3sodium chloridenatural abundance100 mM
4calcium chloridenatural abundance5 mM
5DTTnatural abundance10 mM
6DSSnatural abundance50 uM
Sample #2

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 0.8 mM HR8614A.009, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
7HR8614A.008[biosynthetically directed-5% 13C; U-100% 15N]0.8 mM
8MESnatural abundance20 mM
9sodium chloridenatural abundance100 mM
10calcium chloridenatural abundance5 mM
11DTTnatural abundance10 mM
12DSSnatural abundance50 uM
Sample #3

Solvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 1.0 mM HR8614A.007, 100% D2O


#NameIsotope labelingTypeConcentration
13HR8614A.007[U-100% 13C; U-100% 15N]1.0 mM
14MESnatural abundance20 mM
15sodium chloridenatural abundance100 mM
16calcium chloridenatural abundance5 mM
17DTTnatural abundance10 mM
18DSSnatural abundance50 uM

LACS Plot; CA
Referencing offset: 0.04 ppm, Outliers: 2 Detail
LACS Plot; CB
Referencing offset: 0.04 ppm, Outliers: 2 Detail
LACS Plot; HA
Referencing offset: -0.04 ppm, Outliers: 2 Detail
LACS Plot; CO
Referencing offset: -0.06 ppm, Outliers: 3 Detail
Protein Blocks Logo
Calculated from 20 models in PDB: 2LXU, Strand ID: A Detail


Release date
2012-10-28
Related entities 1. HR8614A, : 1 : 7 : 118 entities Detail
Interaction partners 1. HR8614A, : 3 interactors Detail
Experiments performed 23 experiments Detail
NMR combined restraints 5 contents Detail
Keywords HNRH1_HUMAN, HNRNPH1, HNRPH, HNRPH1, RRM1, Target HR8614A, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), PSI-Biology, Protein NMR, Protein Structure Initiative, RRM, Structural Genomics