Structure of perimidinone-derived synthetic nucleoside paired with guanine in DNA duplex
Polymer type: polydeoxyribonucleotide
Total | 1H | |
---|---|---|
All | 86.9 % (93 of 107) | 86.9 % (93 of 107) |
Suger, PO4 | 97.4 % (75 of 77) | 97.4 % (75 of 77) |
Nucleobase | 60.0 % (18 of 30) | 60.0 % (18 of 30) |
Aromatic | 72.7 % (16 of 22) | 72.7 % (16 of 22) |
Methyl | 100.0 % (2 of 2) | 100.0 % (2 of 2) |
1. 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP)[D3N]P-D(*GP*CP*GP)-3'
CGCGAATTXG CGSolvent system 100% D2O, Pressure 1 atm, Temperature 283 K, pH 7, Details 10 mM NaH2PO4 100 mM NaCl 50 uM Na2EDTA
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP)[D3N]P-D(*GP*CP*GP)-3' | natural abundance | 0.53 mM | |
2 | D2O | [U-100% 2H] | 100 % | |
3 | sodium chloride | natural abundance | 100 mM | |
4 | EDTA | natural abundance | 50 uM | |
5 | sodium phosphate | natural abundance | 10 mM |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 283 K, pH 7, Details 10 mM NaH2PO4 100 mM NaCl 50 uM Na2EDTA
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
6 | 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP)[D3N]P-D(*GP*CP*GP)-3' | natural abundance | 0.53 mM | |
7 | D2O | [U-100% 2H] | 90 % | |
8 | H2O | natural abundance | 10 % | |
9 | sodium phosphate | natural abundance | 10 mM | |
10 | EDTA | natural abundance | 50 uM | |
11 | sodium chloride | natural abundance | 100 mM |