BMRB: 18907

Solution structure of Duplex DNA

Authors

Ghosh, A., Kar, R.K., Jana, J., Biswas, A., Ghosh, S., Kumar, D., Chatterjee, S., Bhunia, A.

Assembly

Duplex DNA

Entity

1. DNA GCGCATGCTACGCG (polymer, Thiol state: not present), 14 monomers, 4344.751 Da Detail

GCGCATGCTA CGCG

2. DNA CGCGTAGCATGCGC (polymer, Thiol state: not present), 14 monomers, 4344.751 Da Detail

CGCGTAGCAT GCGC

Total weight

8689.502 Da

Max. entity weight

4344.751 Da

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 75.7 %, Completeness (bb): 71.4 % Detail

Download

• NMR-STAR v3.1 (partial)
• BMRB/XML (partial)
• CSV
• TSV

Polymer type: polydeoxyribonucleotide

	Total	1H
All	75.7 % (209 of 276)	75.7 % (209 of 276)
Suger, PO4	71.4 % (140 of 196)	71.4 % (140 of 196)
Nucleobase	86.3 % (69 of 80)	86.3 % (69 of 80)
Aromatic	89.3 % (50 of 56)	89.3 % (50 of 56)
Methyl	100.0 % (4 of 4)	100.0 % (4 of 4)

1. DNA GCGCATGCTACGCG

GCGCATGCTA CGCG

2. DNA CGCGTAGCATGCGC

CGCGTAGCAT GCGC

Show sample condition

Sample

Solvent system 95% H2O/5% D2O, Temperature 298 K, pH 7.2

#	Name	Isotope labeling	Type	Concentration
1	GCGCATGCTACGCG	natural abundance		1 mM
2	CGCGTAGCATGCGC	natural abundance		1 mM

Hide sample codition

Release date

2013-01-10

Citation

Structural Insights of DNA Duplex Stabilization by Potent Antimicrobial Peptide Indolicidin
Ghosh, A., Kar, R.K., Jana, J., Biswas, A., Ghosh, S., Kumar, D., Chatterjee, S., Bhunia, A.
Not known

Experiments performed 3 experiments Detail