Spatial Structure of Antimicrobial Peptide SmAMP2-2c from Seeds of Stellaria media
ID | Type | Value order | Atom ID 1 | Atom ID 2 |
---|---|---|---|---|
1 | disulfide | sing | 1:CYS5:SG | 1:CYS16:SG |
2 | disulfide | sing | 1:CYS10:SG | 1:CYS22:SG |
3 | disulfide | sing | 1:CYS15:SG | 1:CYS29:SG |
Polymer type: polypeptide(L)
Total | 1H | 13C | |
---|---|---|---|
All | 89.7 % (235 of 262) | 100.0 % (151 of 151) | 75.7 % (84 of 111) |
Backbone | 81.9 % (122 of 149) | 100.0 % (67 of 67) | 67.1 % (55 of 82) |
Sidechain | 100.0 % (135 of 135) | 100.0 % (84 of 84) | 100.0 % (51 of 51) |
Aromatic | 100.0 % (32 of 32) | 100.0 % (16 of 16) | 100.0 % (16 of 16) |
Methyl | 100.0 % (10 of 10) | 100.0 % (5 of 5) | 100.0 % (5 of 5) |
1. SmAMP2-2c
AAGQCYRGRC SGGLCCSKYG YCGSGPAYCGSolvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 303 (±1) K, pH 4.5 (±0.05)
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | SmAMP2-2c | natural abundance | 0.8 (±0.1) mM | |
2 | sodium acetate | natural abundance | 20 (±0.1) mM | |
3 | sodium chloride | natural abundance | 30 (±0.1) mM |
Solvent system 100% D2O, Pressure 1 atm, Temperature 303 (±1) K, pH 4.5 (±0.05)
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
4 | SmAMP2-2c | natural abundance | 0.8 (±0.1) mM | |
5 | sodium acetate | natural abundance | 20 (±0.1) mM | |
6 | sodium chloride | natural abundance | 30 (±0.1) mM |
Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 303 (±1) K, pH 4.5 (±0.05)
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
7 | SmAMP2-2c | natural abundance | 2 (±0.1) mM | |
8 | sodium acetate | natural abundance | 10 (±0.1) mM | |
9 | sodium chloride | natural abundance | 70 (±0.1) mM |