BMRBj - BMREntryMaster

	Total	¹H	¹³C	¹⁵N
All	89.7 % (935 of 1042)	90.5 % (494 of 546)	87.9 % (355 of 404)	93.5 % (86 of 92)
Backbone	89.4 % (490 of 548)	89.9 % (170 of 189)	88.3 % (241 of 273)	91.9 % (79 of 86)
Sidechain	88.8 % (514 of 579)	89.6 % (320 of 357)	87.0 % (188 of 216)	100.0 % (6 of 6)
Aromatic	60.9 % (28 of 46)	65.2 % (15 of 23)	59.1 % (13 of 22)	0.0 % (0 of 1)
Methyl	100.0 % (84 of 84)	100.0 % (42 of 42)	100.0 % (42 of 42)

1. Cdc37

GHMGPGGLDP VEVYESLPEE LQKCFDVKDV QMLQDAISKM DPTDAKYHMQ RCIDSGLWVP NSKASEAKEG EEAGPGDPLL EAVPKTGDEK DVSV

Show sample condition

Sample #1

Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

Sample #2

Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
7	Cdc37	[U-100% 15N]	0.3 ~ 0.5 mM
8	sodium chloride	natural abundance	100 mM
9	HEPES	natural abundance	50 mM
10	D2O	[U-2H]	7 %
11	H2O	natural abundance	93 %
12	DTT	natural abundance	2 mM

Sample #3

Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
13	Cdc37	[U-10% 13C; U-100% 15N]	0.3 ~ 0.5 mM
14	sodium chloride	natural abundance	100 mM
15	HEPES	natural abundance	5 mM
16	D2O	[U-2H]	7 %
17	H2O	natural abundance	93 %
18	DTT	natural abundance	2 mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0

Referencing offset: -0.17 ppm, Outliers: 2 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0

Referencing offset: -0.17 ppm, Outliers: 2 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0

Referencing offset: 0.02 ppm, Outliers: 1 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Value	Ref. method	Ref. type	Shift ratio
¹H	DSS	methyl protons	0.0 ppm	internal	direct	1.0

Referencing offset: -0.04 ppm, Outliers: 2 Detail

Protein Blocks Logo

Calculated from 10 models in PDB: 2N5X, Strand ID: A Detail

Release date

2015-10-04

Citation

The C-terminal domain of human Cdc37 studied by solution NMR
Zhang, Z., Keramisanou, D., Dudhat, A., Pare, M., Gelis, I.
J. Biomol. NMR (2015), 63, 315-321, PubMed 26400850 , DOI 10.1007/s10858-015-9988-6 , Abstract

Related entities 1. C-terminal domain of Cdc37 cochaperone, : 1 : 13 entities Detail

Interaction partners 1. C-terminal domain of Cdc37 cochaperone, : 258 interactors Detail

More details for 258 interactors identified by 35 citations

Experiments performed 14 experiments Detail

1 3D HNCA

Instrument

Varian VNMRS - 600 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

2 3D HN(CO)CA

Instrument

Varian VNMRS - 600 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

3 3D HNCACB

Instrument

Varian VNMRS - 600 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

4 3D CBCA(CO)NH

Instrument

Varian VNMRS - 600 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

5 2D 1H-15N HSQC

Instrument

Varian VNMRS - 800 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
7	Cdc37	[U-100% 15N]	0.3 ~ 0.5 mM
8	sodium chloride	natural abundance	100 mM
9	HEPES	natural abundance	50 mM
10	D2O	[U-2H]	7 %
11	H2O	natural abundance	93 %
12	DTT	natural abundance	2 mM

6 2D 1H-13C HSQC

Instrument

Varian VNMRS - 600 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

7 2D 1H-13C HSQC aliphatic

Instrument

Varian VNMRS - 800 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
13	Cdc37	[U-10% 13C; U-100% 15N]	0.3 ~ 0.5 mM
14	sodium chloride	natural abundance	100 mM
15	HEPES	natural abundance	5 mM
16	D2O	[U-2H]	7 %
17	H2O	natural abundance	93 %
18	DTT	natural abundance	2 mM

8 3D H(CCO)NH

Instrument

Varian VNMRS - 800 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

9 3D C(CO)NH

Instrument

Varian VNMRS - 800 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

10 3D 1H-15N NOESY

Instrument

Varian VNMRS - 800 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
7	Cdc37	[U-100% 15N]	0.3 ~ 0.5 mM
8	sodium chloride	natural abundance	100 mM
9	HEPES	natural abundance	50 mM
10	D2O	[U-2H]	7 %
11	H2O	natural abundance	93 %
12	DTT	natural abundance	2 mM

11 3D 1H-13C NOESY aliphatic

Instrument

Varian VNMRS - 800 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

12 2D 1H-13C HSQC aromatic

Instrument

Varian VNMRS - 800 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

13 2D 1H-15N HSQC

Instrument

Varian VNMRS - 800 MHz

Sample

State anisotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
7	Cdc37	[U-100% 15N]	0.3 ~ 0.5 mM
8	sodium chloride	natural abundance	100 mM
9	HEPES	natural abundance	50 mM
10	D2O	[U-2H]	7 %
11	H2O	natural abundance	93 %
12	DTT	natural abundance	2 mM

14 3D HNCO

Instrument

Varian VNMRS - 600 MHz

Sample

State isotropic, Solvent system 93% H2O/7% D2O, Pressure 1 atm, Temperature 303 K, pH 7.5, Details 50mM Hepes, pH=7.5, 100mM NaCl, 2mM DTT

#	Name	Isotope labeling	Concentration
1	Cdc37	[U-100% 13C; U-100% 15N]	0.3 ~ 0.5 mM
2	sodium chloride	natural abundance	100 mM
3	HEPES	natural abundance	50 mM
4	D2O	[U-100% 2H]	7 %
5	H2O	natural abundance	93 %
6	DTT	natural abundance	2 mM

NMR combined restraints 6 contents Detail

Properties

Input source #1: NMR data (NEF) - Assigned chemical shifts, Distance restraints, Dihedral angle restraints, RDC restraints	combined_25740_2n5x.nef
Input source #2: Coordindates	2n5x.cif
Diamagnetism of the molecular assembly	True (excluding Oxygen atoms)
Whether the assembly has a disulfide bond	None
Whether the assembly has a other bond	None
Whether the assembly contains a cyclic polymer	None
Overall data processing status	Warning

Disulfide bonds

None

Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)

None

Non-standard residues

None

Sequence alignments

Entity_assembly_ID (NMR): A vs Auth_asym_ID (model): A

---290-------300-------310-------320-------330-------340-------350-------360-------370--------
GHMGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPGDPLLEAVPKTGDEKDVSV
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GHMGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPGDPLLEAVPKTGDEKDVSV
--------10--------20--------30--------40--------50--------60--------70--------80--------90----

Chain assignments

Entity_assembly_ID (NMR)	Auth_asym_ID (model)	Length	Unmapped	Conflict	Sequence coverage (%)
A	A	94	0	0	100.0

Content subtype: combined_25740_2n5x.nef

#	Content subtype	Saveframe	Status	# of rows (sets)	Experiment type	Sequence coverage (%)
1	Assigned chemical shifts	assigned_chem_shift_list_1	Warning	932		95.7 (chain: A, length: 94)
1	Distance restraints	DYANA/DIANA_distance_constraints_5	Warning	1341 (1)	noe	85.1 (chain: A, length: 94)
2	Distance restraints	DYANA/DIANA_distance_constraints_4	Warning	88 (1)	hbond	38.3 (chain: A, length: 94)
1	Dihedral angle restraints	DYANA/DIANA_dihedral_2	Warning	90 (86)	.	61.7 (chain: A, length: 94)
1	RDC restraints	DYANA/DIANA_dipolar_coupling_3	OK	58 (58)	.	61.7 (chain: A, length: 94)

Assigned chemical shifts

Saveframe: assigned_chem_shift_list_1
- Status: Warning
- Sequence coverage of experimental data
  - Entity_assembly_ID: A, Chain length: 94, Sequence coverage: 95.7%
- Total number of assignments
  - ¹H chemical shifts: 495
  - ¹³C chemical shifts: 351
  - ¹⁵N chemical shifts: 86
- Completeness of assignments
  - Entity_assemble_ID: A
- Redox state of CYS
- Peptide bond of PRO
- Rotameric state of ILE , LEU, and VAL
- Histogram of normalized assigned chemical shifts
- Random coil index and derived parameters (S² and NMR RMSD)
  - Chain_ID: A

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	546	495	90.7
¹³C chemical shifts	404	351	86.9
¹⁵N chemical shifts	93	86	92.5

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	189	174	92.1
¹³C chemical shifts	188	163	86.7
¹⁵N chemical shifts	86	80	93.0

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	357	321	89.9
¹³C chemical shifts	216	188	87.0
¹⁵N chemical shifts	7	6	85.7

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	46	44	95.7
¹³C chemical shifts	46	44	95.7

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	23	15	65.2
¹³C chemical shifts	22	13	59.1
¹⁵N chemical shifts	1	1	100.0

Distance restraints

Saveframe: DYANA/DIANA_distance_constraints_5
- Status: Warning
- Experiment type: noe
- Sequence coverage of experimental data
  - Entity_assembly_ID: A, Chain length: 94, Sequence coverage: 85.1%
- Total number of restraints: 1341
- Weight of restraints: 1.0 (1341)
- Potential type of restraints: upper-bound-parabolic (1341)
- Range of distance target values: 2.47, 5.5 (Å)
- Histogram of distance target values
- Histogram of discrepancy in distance target values
- Distance restraints per residue
  - Chain_ID: A
- Distance restraints on contact map
- Saveframe: DYANA/DIANA_distance_constraints_4
  - Status: Warning
  - Experiment type: hbond
  - Sequence coverage of experimental data
    - Entity_assembly_ID: A, Chain length: 94, Sequence coverage: 38.3%
  - Total number of restraints: 88
  - Weight of restraints: 1.0 (88)
  - Potential type of restraints: upper-bound-parabolic (88)
  - Range of distance target values: 1.8, 3.0 (Å)
  - Histogram of distance target values
  - Histogram of discrepancy in distance target values
  - Distance restraints per residue
    - Chain_ID: A
  - Distance restraints on contact map

Dihedral angle restraints

Saveframe: DYANA/DIANA_dihedral_2
- Status: Warning
- Experiment type: .
- Sequence coverage of experimental data
  - Entity_assembly_ID: A, Chain length: 94, Sequence coverage: 61.7%
- Total number of restraints: 86
- Total number of restraints per polymer type: 86
- Weight of restraints: 1.0 (86)
- Potential type of restraints: square-well-parabolic (86)
- Plot of Phi-Psi angle restraints
- Dihedral angle restraints per residue
  - Chain_ID: A

RDC restraints

Saveframe: DYANA/DIANA_dipolar_coupling_3

Status: OK
Experiment type: .

Sequence coverage of experimental data

Entity_assembly_ID: A, Chain length: 94, Sequence coverage: 61.7%

---290-------300-------310-------320-------330-------340-------350-------360-------370--------
GHMGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPGDPLLEAVPKTGDEKDVSV
   | ||||  |||||| || |  |||| ||||| || | | ||| |||||| ||| ||     | | || ||| || ||||   |||    | 
...G.GGLD..EVYESL.EE.Q..FDVK.VQMLQ.AI.K.D.TDA.YHMQRC.DSG.WV.....S.A.EG.EAG.GD.LLEA...TGD....S 
---290-------300-------310-------320-------330-------340-------350-------360-------370-------

Total number of restraints: 58
Potential type of restraints: undefined (58)
Range of observed RDC values: 100.0, -100.0 (Hz)
RDC restraints per residue
- Chain_ID: A
  None

Keywords Hsp90, cdc37, co-chaperone, kinase

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Found 1 Document (3.23 seconds)

BMRB: 25740

Sample #1

Sample #2

Sample #3

Chemical shift reference

Chemical shift reference

Chemical shift reference

Chemical shift reference

Related entities 1. C-terminal domain of Cdc37 cochaperone, : 1 : 13 entities Detail

Interaction partners 1. C-terminal domain of Cdc37 cochaperone, : 258 interactors Detail

Experiments performed 14 experiments Detail

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NMR combined restraints 6 contents Detail