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CYSTEIN KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE
Authors
Filipp, F.V., Tikole, S.
Assembly
CYSTEIN KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE
Entity
1. CYSTEIN KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE (polymer), 36 monomers, 3837.402 Da Detail

GCILNGRTDL GTLLFRCRRD SDCPGACICR GNGYCG


Formula weight
3837.402 Da
Exptl. method
solution NMR
Refine. method
simulated annealing, torsion angle dynamics
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 94.4 %, Completeness: 32.8 %, Completeness (bb): 75.6 % Detail

Polymer type: polypeptide(L)

Total1H
All32.8 % (64 of 195)32.8 % (64 of 195)
Backbone75.6 % (59 of 78)75.6 % (59 of 78)
Sidechain 4.3 % (5 of 117) 4.3 % (5 of 117)
Aromatic 0.0 % (0 of 9) 0.0 % (0 of 9)
Methyl 0.0 % (0 of 15) 0.0 % (0 of 15)

1. entity

GCILNGRTDL GTLLFRCRRD SDCPGACICR GNGYCG

Sample #1

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 300 (±0.2) K, pH 6.0 (±0.1), Details 20mM KP pH6.0


#NameIsotope labelingTypeConcentration
1KNOTnatural abundance2 mM
2potassium phosphatenatural abundance20 mM
3H2Onatural abundance90 %
4D2Onatural abundance10 %
Sample #2

Solvent system 100% D2O, Pressure 1 atm, Temperature 300 (±0.2) K, pH 6.0 (±0.1), Details 20mM KP pH6.0


#NameIsotope labelingTypeConcentration
5KNOTnatural abundance2 mM
6potassium phosphatenatural abundance20 mM
7D2O[U-2H]100 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2N8B, Strand ID: A Detail


Release date
2016-10-26
Citation
Cystein knot with 2-FP label and integrin AvB6 cancer recognition site
Filipp, F.V., Tikole, S.
Not known
Related entities 1. CYSTEIN KNOT WITH INTEGRIN AVB6 CANCER RECOGNITION SITE, : 1 : 2 : 5 entities Detail
Experiments performed 4 experiments Detail
NMR combined restraints 3 contents Detail
Keywords cancer, cystein knot, imaging, knot, knottin