Search

Solution structure of KYE28A in lipopolysachharide
Authors
Bhunia, A., Malmsten, M., Datta, A.
Assembly
KYE28A in lipopolysachharide
Entity
1. KYE28A in lipopolysachharide (polymer, Thiol state: not present), 28 monomers, 3274.782 Da Detail

KYEITTIHNL ARKLTHRLAR RNAGATLR


Formula weight
3274.782 Da
Exptl. method
solution NMR
Refine. method
distance geometry
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 96.4 %, Completeness: 80.7 %, Completeness (bb): 93.0 % Detail

Polymer type: polypeptide(L)

Total1H
All80.7 % (142 of 176)80.7 % (142 of 176)
Backbone93.0 % (53 of 57)93.0 % (53 of 57)
Sidechain74.8 % (89 of 119)74.8 % (89 of 119)
Aromatic75.0 % (6 of 8)75.0 % (6 of 8)
Methyl90.0 % (18 of 20)90.0 % (18 of 20)

1. entity

KYEITTIHNL ARKLTHRLAR RNAGATLR

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 4.5


#NameIsotope labelingTypeConcentration
1entitynatural abundance1 mM
2TSPnatural abundance1 mM
3H2Onatural abundance90 %
4D2Onatural abundance10 %

Protein Blocks Logo
Calculated from 20 models in PDB: 2NAU, Strand ID: A Detail


Release date
2016-05-22
Citation
Role of Aromatic Amino Acids in Lipopolysaccharide and Membrane Interactions of Antimicrobial Peptides for Use in Plant Disease Control
Bhunia, A., Malmsten, M., Datta, A.
J. Biol. Chem. (2016), 291, 13301-13317, PubMed 27137928 , DOI 10.1074/jbc.M116.719575 ,
Related entities 1. KYE28A in lipopolysachharide, : 1 : 9 : 5 entities Detail
Interaction partners 1. KYE28A in lipopolysachharide, : 6 interactors Detail
Experiments performed 2 experiments Detail
NMR combined restraints 4 contents Detail
Keywords antimicrobial peptide mutant