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Sequence-specific solid-state NMR assignments of the mouse ASC PYRIN domain in its filament form
Authors
Ravotti, F., Sborgi, L., Cadalbert, R., Huber, M., Hiller, S., Meier, B.H., Boeckmann, A.
Assembly
Mouse ASC PYD
Entity
1. Mouse ASC PYD (polymer, Thiol state: not present), 91 monomers, 10366.89 Da Detail

MGRARDAILD ALENLSGDEL KKFKMKLLTV QLREGYGRIP RGALLQMDAI DLTDKLVSYY LESYGLELTM TVLRDMGLQE LAEQLQTTKE E


Formula weight
10366.89 Da
Source organism
Mus musculus
Exptl. method
NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 91.2 %, Completeness: 87.9 %, Completeness (bb): 89.9 % Detail

Polymer type: polypeptide(L)

Total13C15N
All87.9 % (452 of 514)88.0 % (368 of 418)87.5 % (84 of 96)
Backbone89.9 % (320 of 356)89.8 % (239 of 266)90.0 % (81 of 90)
Sidechain85.5 % (207 of 242)86.4 % (204 of 236)50.0 % (3 of 6)
Aromatic100.0 % (21 of 21)100.0 % (21 of 21)
Methyl88.3 % (53 of 60)88.3 % (53 of 60)

1. Mouse ASC PYD

MGRARDAILD ALENLSGDEL KKFKMKLLTV QLREGYGRIP RGALLQMDAI DLTDKLVSYY LESYGLELTM TVLRDMGLQE LAEQLQTTKE E

Sample

Solvent system ethanol/water, Pressure 1 atm, Temperature 273 K, pH 7.5


#NameIsotope labelingTypeConcentration
1Mouse ASC PYD[U-100% 13C; U-100% 15N]20 mg

LACS Plot; CA
Referencing offset: -0.37 ppm, Outliers: 1 Detail
LACS Plot; CB
Referencing offset: -0.37 ppm, Outliers: 1 Detail
LACS Plot; CO
Referencing offset: -0.47 ppm, Outliers: 1 Detail
Protein Blocks Logo
Calculated from 10 models in PDB: 2N1F, Strand ID: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O Detail


Release date
2015-10-11
Citation
Structure and assembly of the mouse ASC inflammasome by combined NMR spectroscopy and cryo-electron microscopy
Sborgi, L., Ravotti, F., Dandey, V.P., Dick, M.S., Mazur, A., Reckel, S., Chami, M., Scherer, S., Huber, M., Bockmann, A., Egelman, E.H., Stahlberg, H., Broz, P., Meier, B.H., Hiller, S.
Proc. Natl. Acad. Sci. U. S. A. (2015), 112, 13237-13242, PubMed 26464513 , DOI 10.1073/pnas.1507579112 ,
Related entities 1. Mouse ASC PYD, : 1 : 2 : 1 : 93 entities Detail
Interaction partners 1. Mouse ASC PYD, : 10 interactors Detail
Experiments performed 12 experiments Detail
NMR combined restraints 4 contents Detail