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Solid-state NMR assignment of P. horikoshii TET2
Authors
Sivertsen, A.C., Schanda, P.
Assembly
TET
Entity
1. TET (polymer, Thiol state: all free), 353 monomers, 39013.56 Da Detail

MEVRNMVDYE LLKKVVEAPG VSGYEFLGIR DVVIEEIKDY VDEVKVDKLG NVIAHKKGEG PKVMIAAHMD QIGLMVTHIE KNGFLRVAPI GGVDPKTLIA QRFKVWIDKG KFIYGVGASV PPHIQKPEDR KKAPDWDQIF IDIGAESKEE AEDMGVKIGT VITWDGRLER LGKHRFVSIA FDDRIAVYTI LEVAKQLKDA KADVYFVATV QEEVGLRGAR TSAFGIEPDY GFAIDVTIAA DIPGTPEHKQ VTHLGKGTAI KIMDRSVICH PTIVRWLEEL AKKHEIPYQL EILLGGGTDA GAIHLTKAGV PTGALSVPAR YIHSNTEVVD ERDVDATVEL MTKALENIHE LKI


Formula weight
39013.56 Da
Source organism
Pyrococcus horikoshii
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 88.1 %, Completeness: 42.0 %, Completeness (bb): 64.4 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All42.0 % (1720 of 4096)15.3 % (324 of 2117)68.2 % (1107 of 1624)81.4 % (289 of 355)
Backbone64.4 % (1344 of 2088)30.1 % (217 of 722)81.6 % (839 of 1028)85.2 % (288 of 338)
Sidechain27.0 % (629 of 2330) 7.7 % (107 of 1395)56.8 % (521 of 918) 5.9 % (1 of 17)
Aromatic 0.0 % (0 of 268) 0.0 % (0 of 134) 0.0 % (0 of 130) 0.0 % (0 of 4)
Methyl40.5 % (191 of 472) 5.9 % (14 of 236)75.0 % (177 of 236)

1. TET

MEVRNMVDYE LLKKVVEAPG VSGYEFLGIR DVVIEEIKDY VDEVKVDKLG NVIAHKKGEG PKVMIAAHMD QIGLMVTHIE KNGFLRVAPI GGVDPKTLIA QRFKVWIDKG KFIYGVGASV PPHIQKPEDR KKAPDWDQIF IDIGAESKEE AEDMGVKIGT VITWDGRLER LGKHRFVSIA FDDRIAVYTI LEVAKQLKDA KADVYFVATV QEEVGLRGAR TSAFGIEPDY GFAIDVTIAA DIPGTPEHKQ VTHLGKGTAI KIMDRSVICH PTIVRWLEEL AKKHEIPYQL EILLGGGTDA GAIHLTKAGV PTGALSVPAR YIHSNTEVVD ERDVDATVEL MTKALENIHE LKI

Sample #1

Solvent system H2O, Pressure 1 atm, Temperature 298 (±2) K, pH 7.5 (±0.1), Details TET2_MPD, 13C,15N labelled


#NameIsotope labelingTypeConcentration
1TRISnatural abundance50 (±5.0) mM
2sodium chloridenatural abundance20 (±1.0) mM
3TET[U-99% 13C; U-99% 15N]50 (±10.0) % w/w
Sample #2

Solvent system H2O, Pressure 1 atm, Temperature 298 (±2) K, pH 7.5 (±0.1), Details TET2_MPD_DCN, 2H,13C,15N labelled


#NameIsotope labelingTypeConcentration
4TRISnatural abundance50 (±5.0) mM
5sodium chloridenatural abundance20 (±1.0) mM
6TET[U-13C; U-15N; U-2H]50 (±10.0) % w/w
Sample #3

Solvent system H2O, Pressure 1 atm, Temperature 298 (±2) K, pH 7.5 (±0.1), Details TET2_MPD


#NameIsotope labelingTypeConcentration
7TRISnatural abundance50 (±5.0) mM
8sodium chloridenatural abundance20 (±1.0) mM
9TET13C,15N at Ile, Leu, Val50 (±10.0) % w/w
Sample #4

Solvent system H2O, Pressure 1 atm, Temperature 298 (±2) K, pH 7.5 (±0.1), Details TET2_MPD_DCN, 13C,15N at Leu, Lys, Pro


#NameIsotope labelingTypeConcentration
10TRISnatural abundance50 (±5.0) mM
11sodium chloridenatural abundance20 (±1.0) mM
12TET13C,15N at Leu, Lys, Pro50 (±10.0) % w/w
Sample #5

Solvent system H2O, Pressure 1 atm, Temperature 298 (±2) K, pH 7.5 (±0.1), Details TET2_MPD_DCN, 13C,15N at Gly, Tyr, Phe, Arg


#NameIsotope labelingTypeConcentration
13TRISnatural abundance50 (±5.0) mM
14sodium chloridenatural abundance20 (±1.0) mM
15TET13C,15N at Gly, Tyr, Phe, Arg50 (±10.0) % w/w

LACS Plot; CA
Referencing offset: 0.17 ppm, Outliers: 4 Detail
LACS Plot; CB
Referencing offset: 0.17 ppm, Outliers: 4 Detail
LACS Plot; CO
Referencing offset: 0.25 ppm, Outliers: 4 Detail
Protein Blocks Logo
Calculated from 10 models in PDB: 6F3K, Strand ID: A Detail


Release date
2017-08-08
Citation
Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex
Gauto, D.F., Estrozi, L.F., Schwieters, C.D., Effantin, G., Macek, P., Sounier, R., Sivertsen, A.C., Schmidt, E., Kerfah, R., Mas, G., Colletier, J.P., Guntert, P., Favier, A., Schoehn, G., Schanda, P., Boisbouvier, J.
Nat. Commun. (2019), 10, 2697-2697, PubMed 31217444 , DOI 10.1038/s41467-019-10490-9 ,
Related entities 1. TET, : 1 : 6 : 43 entities Detail
Experiments performed 36 experiments Detail
nullKeywords aminopeptidase, protein quality control machinery