Solution Structure of a DNA Dodecamer with 5-methylcytosine at the 3rd Position and 9th position
Polymer type: polydeoxyribonucleotide
Total | 1H | |
---|---|---|
All | 64.6 % (62 of 96) | 64.6 % (62 of 96) |
Suger, PO4 | 67.1 % (47 of 70) | 67.1 % (47 of 70) |
Nucleobase | 57.7 % (15 of 26) | 57.7 % (15 of 26) |
Aromatic | 65.0 % (13 of 20) | 65.0 % (13 of 20) |
Methyl | 100.0 % (2 of 2) | 100.0 % (2 of 2) |
1. entity 1
CGXGAATTXG CGSolvent system 100% D2O, Pressure 1 atm, Temperature 298 K, pH 6.8, Details 50 mM sodium chloride, 10 mM potassium phosphate, 0.1 mM EDTA, 1 mM DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*(DMC)P*GP*CP*G)-3'), 100% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*(DMC)P*GP*CP*G)-3') | natural abundance | 1 mM | |
2 | EDTA | natural abundance | 0.1 mM | |
3 | potassium phosphate | natural abundance | 10 mM | |
4 | sodium chloride | natural abundance | 50 mM |
Polymer type: polydeoxyribonucleotide
Total | 1H | |
---|---|---|
All | 37.0 % (71 of 192) | 37.0 % (71 of 192) |
Suger, PO4 | 33.6 % (47 of 140) | 33.6 % (47 of 140) |
Nucleobase | 46.2 % (24 of 52) | 46.2 % (24 of 52) |
Aromatic | 50.0 % (20 of 40) | 50.0 % (20 of 40) |
Methyl | 50.0 % (2 of 4) | 50.0 % (2 of 4) |
1. entity 1
CGXGAATTXG CGSolvent system 100% D2O, Pressure 1 atm, Temperature 278 K, pH 6.8, Details 50 mM sodium chloride, 10 mM potassium phosphate, 0.1 mM EDTA, 1 mM DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*(DMC)P*GP*CP*G)-3'), 100% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | DNA (5'-D(*CP*GP*(DMC)P*GP*AP*AP*TP*TP*(DMC)P*GP*CP*G)-3') | natural abundance | 1 mM | |
2 | EDTA | natural abundance | 0.1 mM | |
3 | potassium phosphate | natural abundance | 10 mM | |
4 | sodium chloride | natural abundance | 50 mM |