Solution Structure of a DNA Dodecamer with 5-methylcytosine at the 9th position and 8-oxoguanine at the 10th position
Polymer type: polydeoxyribonucleotide
Total | 1H | |
---|---|---|
All | 10.2 % (10 of 98) | 10.2 % (10 of 98) |
Suger, PO4 | 0.0 % (0 of 70) | 0.0 % (0 of 70) |
Nucleobase | 35.7 % (10 of 28) | 35.7 % (10 of 28) |
Aromatic | 30.0 % (6 of 20) | 30.0 % (6 of 20) |
Methyl | 0.0 % (0 of 2) | 0.0 % (0 of 2) |
1. entity 1
CGCGAATTXX CGSolvent system 100% D2O, Pressure 1 null, Temperature 278 K, pH 6.8, Details 50 mM sodium chloride, 10 mM potassium chloride, 0.1 mM EDTA, 1 mM DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(DMC)P*(8OG)P*CP*G)-3'), 100% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(DMC)P*(8OG)P*CP*G)-3') | natural abundance | 1 mM | |
2 | EDTA | natural abundance | 0.1 mM | |
3 | potassium chloride | natural abundance | 10 mM | |
4 | sodium chloride | natural abundance | 50 mM |
Polymer type: polydeoxyribonucleotide
Total | 1H | |
---|---|---|
All | 34.2 % (67 of 196) | 34.2 % (67 of 196) |
Suger, PO4 | 28.6 % (40 of 140) | 28.6 % (40 of 140) |
Nucleobase | 48.2 % (27 of 56) | 48.2 % (27 of 56) |
Aromatic | 52.5 % (21 of 40) | 52.5 % (21 of 40) |
Methyl | 50.0 % (2 of 4) | 50.0 % (2 of 4) |
1. entity 1
CGCGAATTXX CGSolvent system 100% D2O, Pressure 1 null, Temperature 298 K, pH 6.8, Details 50 mM sodium chloride, 10 mM potassium chloride, 0.1 mM EDTA, 1 mM DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(DMC)P*(8OG)P*CP*G)-3'), 100% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(DMC)P*(8OG)P*CP*G)-3') | natural abundance | 1 mM | |
2 | EDTA | natural abundance | 0.1 mM | |
3 | potassium chloride | natural abundance | 10 mM | |
4 | sodium chloride | natural abundance | 50 mM |