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Hs05 - Intragenic antimicrobial peptide
Authors
Santos, M.A., Silva, E.M.C., Brand, G.D., Oliveira, A.L.
Assembly
Intragenic antimicrobial peptide (E.C.2.3.1.-)
Entity
1. Intragenic antimicrobial peptide (E.C.2.3.1.-) (polymer, Thiol state: not present), 17 monomers, 2061.581 Da Detail

LMGLFNRIIR KVVKLFN


Formula weight
2061.581 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
distance geometry
Data set
assigned_chemical_shifts, spectral_peak_list
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 81.3 %, Completeness (bb): 94.3 % Detail

Polymer type: polypeptide(L)

Total1H
All81.3 % (100 of 123)81.3 % (100 of 123)
Backbone94.3 % (33 of 35)94.3 % (33 of 35)
Sidechain76.1 % (67 of 88)76.1 % (67 of 88)
Aromatic60.0 % (6 of 10)60.0 % (6 of 10)
Methyl64.3 % (9 of 14)64.3 % (9 of 14)

1. entity 1

LMGLFNRIIR KVVKLFN

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 (±0.1) atm, Temperature 298 (±0.2) K, pH 7.4 (±0.05), Details 1.28 mM peptide, 32 mM D-98% Dodecylphosphorylcholine-d38, 10 mM PBS, 90% H2O/10% D2O


#NameIsotope labelingTypeConcentration
1peptidenatural abundance1.28 (±0.2) mM
2Dodecylphosphorylcholine-d38D-98%32 (±0.2) mM
3PBSnatural abundance10 (±0.2) mM

Protein Blocks Logo
Calculated from 10 models in PDB: 6VLA, Strand ID: A Detail


Release date
2020-05-05
Citation
Characterization of novel human intragenic antimicrobial peptides, incorporation and release studies from ureasil-polyether hybrid matrix
Mariano, G.H., Gomes de Sa, L.G., Carmo da Silva, E.M., Santos, M.A., Cardozo Fh, J.L., Lira, B., Barbosa, E.A., Araujo, A.R., Leite, J., Ramada, M., Bloch, C., Oliveira, A.L., Chaker, J.A., Brand, G.D.
Mater. Sci. Eng. C. Mater. Biol. Appl. (2021), 119, 111581-111581, PubMed 33321627 , DOI 10.1016/j.msec.2020.111581 ,
Related entities 1. Intragenic antimicrobial peptide (E.C.2.3.1.-), : 1 : 5 : 1 entities Detail
Interaction partners 1. Intragenic antimicrobial peptide (E.C.2.3.1.-), : 50 interactors Detail
Experiments performed 2 experiments Detail
NMR combined restraints 3 contents Detail
Keywords ANTIMICROBIAL PROTEIN