NMR solution structure of natural scorpion toxin Cl13
ID | Type | Value order | Atom ID 1 | Atom ID 2 |
---|---|---|---|---|
1 | disulfide | sing | 1:CYS12:SG | 1:CYS65:SG |
2 | disulfide | sing | 1:CYS16:SG | 1:CYS41:SG |
3 | disulfide | sing | 1:CYS25:SG | 1:CYS46:SG |
4 | disulfide | sing | 1:CYS29:SG | 1:CYS48:SG |
Polymer type: polypeptide(L)
Total | 1H | 13C | 15N | |
---|---|---|---|---|
All | 87.2 % (685 of 786) | 98.3 % (400 of 407) | 71.2 % (220 of 309) | 92.9 % (65 of 70) |
Backbone | 81.1 % (318 of 392) | 97.0 % (130 of 134) | 65.5 % (127 of 194) | 95.3 % (61 of 64) |
Sidechain | 93.9 % (428 of 456) | 98.9 % (270 of 273) | 87.0 % (154 of 177) | 66.7 % (4 of 6) |
Aromatic | 83.9 % (99 of 118) | 98.3 % (58 of 59) | 68.4 % (39 of 57) | 100.0 % (2 of 2) |
Methyl | 100.0 % (52 of 52) | 100.0 % (26 of 26) | 100.0 % (26 of 26) |
1. entity 1
KEGYLVDYHT GCKYTCAKLG DNDYCVRECR LRYYQSAHGY CYAFACWCTH LYEQAVVWPL PNKRCKXSolvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 288 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE - 800 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE - 800 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE - 800 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 288 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 303 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 318 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 313 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 318 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 313 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 303 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 288 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 318 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 313 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 303 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE III - 600 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 288 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE - 800 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE - 800 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE - 800 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Bruker AVANCE - 800 MHz CRYOPROBE
State isotropic, Solvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 4.7, Details 2.5 mM Cl13, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | Cl13 | natural abundance | 2.5 mM |
Properties
Disulfide bonds
Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)
NoneNon-standard residues
NoneContent subtype: bmr30727_3.str
Assigned chemical shifts
--------10--------20--------30--------40--------50--------60------- KEGYLVDYHTGCKYTCAKLGDNDYCVRECRLRYYQSAHGYCYAFACWCTHLYEQAVVWPLPNKRCKX |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| KEGYLVDYHTGCKYTCAKLGDNDYCVRECRLRYYQSAHGYCYAFACWCTHLYEQAVVWPLPNKRCK --------10--------20--------30--------40--------50--------60------
Comp_index_ID | Comp_ID | Atom_ID | CS value (ppm) |
---|---|---|---|
4 | TYR | CZ | 157.6 |
8 | TYR | CG | 130.62 |
8 | TYR | CZ | 157.4 |
9 | HIS | CG | 131.9 |
13 | LYS | HZ1 | 7.554 |
13 | LYS | HZ2 | 7.554 |
13 | LYS | HZ3 | 7.554 |
14 | TYR | CG | 132.33 |
14 | TYR | CZ | 157.4 |
24 | TYR | CG | 130.02 |
24 | TYR | CZ | 157.3 |
33 | TYR | CG | 130.87 |
33 | TYR | CZ | 158.3 |
34 | TYR | CG | 130.9 |
34 | TYR | CZ | 157.3 |
38 | HIS | CG | 135.8 |
40 | TYR | CG | 129.32 |
40 | TYR | CZ | 157.4 |
42 | TYR | CG | 128.8 |
42 | TYR | CZ | 157.1 |
47 | TRP | CG | 108.9 |
47 | TRP | CD2 | 129.4 |
47 | TRP | CE2 | 138.6 |
50 | HIS | CG | 133.3 |
52 | TYR | CG | 129.47 |
52 | TYR | CZ | 157.5 |
53 | GLU | CD | 183.17 |
54 | GLN | CD | 180.83 |
58 | TRP | CG | 108.7 |
58 | TRP | CD2 | 130.2 |
58 | TRP | CE2 | 138.3 |
66 | LYS | HZ1 | 7.109 |
66 | LYS | HZ2 | 7.428 |
66 | LYS | HZ3 | 7.428 |
66 | LYS | NZ | 107.99 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 409 | 401 | 98.0 |
13C chemical shifts | 309 | 213 | 68.9 |
15N chemical shifts | 75 | 64 | 85.3 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 134 | 131 | 97.8 |
13C chemical shifts | 132 | 61 | 46.2 |
15N chemical shifts | 65 | 60 | 92.3 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 275 | 270 | 98.2 |
13C chemical shifts | 177 | 152 | 85.9 |
15N chemical shifts | 10 | 4 | 40.0 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 26 | 26 | 100.0 |
13C chemical shifts | 26 | 26 | 100.0 |
Atom group | # of target shifts | # of assigned shifts | Completeness (%) |
---|---|---|---|
1H chemical shifts | 59 | 58 | 98.3 |
13C chemical shifts | 57 | 39 | 68.4 |
15N chemical shifts | 2 | 2 | 100.0 |