BMRB: 30808

Solution structure of the PHD1 domain of histone demethylase KDM5A

Authors

Longbotham, E.J., Kelly, M.J.S., Fujimori, D.G.

Assembly

Lysine-specific demethylase 5A (E.C.1.14.11.67)

Entity

1. Lysine-specific demethylase 5A (E.C.1.14.11.67), entity 1 (polymer, Thiol state: all other bound), 59 monomers, 6599.504 Da Detail

GSVNFVDLYV CMFCGRGNNE DKLLLCDGCD DSYHTFCLIP PLPDVPKGDW RCPKCVAEE

2. Lysine-specific demethylase 5A (E.C.1.14.11.67), entity ZN (non-polymer), 65.409 × 2 Da

Total weight

6730.322 Da

Max. entity weight

6599.504 Da

Entity Connection

na 8 Detail

---

ID	Type	Value order	Atom ID 1	Atom ID 2
1	na	sing	1:CYS11:SG	2:ZN1:ZN
2	na	sing	1:CYS14:SG	2:ZN1:ZN
3	na	sing	1:HIS34:ND1	2:ZN1:ZN
4	na	sing	1:CYS37:SG	2:ZN1:ZN
5	na	sing	1:CYS26:SG	2:ZN1:ZN
6	na	sing	1:CYS29:SG	2:ZN1:ZN
7	na	sing	1:CYS52:SG	2:ZN1:ZN
8	na	sing	1:CYS55:SG	2:ZN1:ZN

Source organism

Homo sapiens

Exptl. method

solution NMR

Data set

assigned_chemical_shifts

Chemcal Shifts

¹H: 380, ¹³C: 202, ¹⁵N: 53 assignments Detail

Download

• NMR-STAR v3.1 (partial)
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ID	Entity ID	Seq ID	Comp ID	Atom ID	Atom type	Val	Val err	Ambig. code
1	1	2	SER	HA	H	4.547	0.005	1
2	1	2	SER	HB2	H	3.857	0.009	1
3	1	2	SER	HB3	H	3.857	0.009	1
4	1	2	SER	CA	C	58.238	0.066	1
5	1	2	SER	CB	C	64.321	0.033	1
6	1	3	VAL	H	H	8.258	0.004	1
7	1	3	VAL	HA	H	4.067	0.003	1
8	1	3	VAL	HB	H	2.032	0.004	1
9	1	3	VAL	HG11	H	0.819	0.004	2
10	1	3	VAL	HG12	H	0.819	0.004	2
11	1	3	VAL	HG13	H	0.819	0.004	2
12	1	3	VAL	HG21	H	0.820	0.004	2
13	1	3	VAL	HG22	H	0.820	0.004	2
14	1	3	VAL	HG23	H	0.820	0.004	2
15	1	3	VAL	CA	C	62.336	0.048	1
16	1	3	VAL	CB	C	32.735	0.036	1
17	1	3	VAL	CG1	C	21.376	0.076	2
18	1	3	VAL	CG2	C	20.404	0.033	2
19	1	3	VAL	N	N	120.331	0.02	1
20	1	4	ASN	H	H	8.383	0.006	1
21	1	4	ASN	HA	H	4.673	0.006	1
22	1	4	ASN	HB2	H	2.683	0.004	2
23	1	4	ASN	HB3	H	2.703	0.008	2
24	1	4	ASN	CA	C	53.020	0.039	1
25	1	4	ASN	CB	C	39.180	0.053	1
26	1	4	ASN	N	N	121.470	0.056	1
27	1	5	PHE	H	H	8.072	0.012	1
28	1	5	PHE	HA	H	4.627	0.007	1
29	1	5	PHE	HB2	H	3.016	0.01	2
30	1	5	PHE	HB3	H	3.200	0.004	2
31	1	5	PHE	HD1	H	7.257	0.004	1
32	1	5	PHE	HD2	H	7.257	0.004	1
33	1	5	PHE	HE1	H	7.353	0.006	1
34	1	5	PHE	HE2	H	7.353	0.006	1
35	1	5	PHE	HZ	H	7.297	0.012	1
36	1	5	PHE	CA	C	58.072	0.062	1
37	1	5	PHE	CB	C	39.625	0.064	1
38	1	5	PHE	CD1	C	131.759	0.062	1
39	1	5	PHE	CD2	C	131.759	0.062	1
40	1	5	PHE	CE1	C	131.875	0.073	1
41	1	5	PHE	CE2	C	131.875	0.073	1
42	1	5	PHE	CZ	C	130.005	0.009	1
43	1	5	PHE	N	N	119.895	0.041	1
44	1	6	VAL	H	H	8.005	0.007	1
45	1	6	VAL	HA	H	4.071	0.004	1
46	1	6	VAL	HB	H	2.018	0.004	1
47	1	6	VAL	HG11	H	0.867	0.011	2
48	1	6	VAL	HG12	H	0.867	0.011	2
49	1	6	VAL	HG13	H	0.867	0.011	2
50	1	6	VAL	HG21	H	0.870	0.013	2
51	1	6	VAL	HG22	H	0.870	0.013	2
52	1	6	VAL	HG23	H	0.870	0.013	2
53	1	6	VAL	CA	C	62.379	0.034	1
54	1	6	VAL	CB	C	32.890	0.077	1
55	1	6	VAL	CG1	C	21.145	0.053	2
56	1	6	VAL	CG2	C	20.169	0.033	2
57	1	6	VAL	N	N	120.279	0.055	1
58	1	7	ASP	H	H	8.225	0.013	1
59	1	7	ASP	HA	H	4.485	0.002	1
60	1	7	ASP	HB2	H	2.546	0.005	2
61	1	7	ASP	HB3	H	2.601	0.005	2
62	1	7	ASP	CA	C	54.637	0.073	1
63	1	7	ASP	CB	C	41.230	0.051	1
64	1	7	ASP	N	N	122.227	0.06	1
65	1	8	LEU	H	H	7.939	0.008	1
66	1	8	LEU	HA	H	4.216	0.012	1
67	1	8	LEU	HB2	H	1.312	0.009	2
68	1	8	LEU	HB3	H	1.404	0.005	2
69	1	8	LEU	HG	H	1.388	0.004	1
70	1	8	LEU	HD11	H	0.834	0.01	2
71	1	8	LEU	HD12	H	0.834	0.01	2
72	1	8	LEU	HD13	H	0.834	0.01	2
73	1	8	LEU	HD21	H	0.764	0.008	2
74	1	8	LEU	HD22	H	0.764	0.008	2
75	1	8	LEU	HD23	H	0.764	0.008	2
76	1	8	LEU	CA	C	55.199	0.052	1
77	1	8	LEU	CB	C	42.950	0.069	1
78	1	8	LEU	CG	C	26.894	0.067	1
79	1	8	LEU	CD1	C	24.667	0.08	2
80	1	8	LEU	CD2	C	23.772	0.058	2
81	1	8	LEU	N	N	120.975	0.05	1
82	1	9	TYR	H	H	8.030	0.007	1
83	1	9	TYR	HA	H	4.579	0.005	1
84	1	9	TYR	HB2	H	2.953	0.006	2
85	1	9	TYR	HB3	H	2.677	0.006	2
86	1	9	TYR	HD1	H	7.106	0.005	1
87	1	9	TYR	HD2	H	7.106	0.005	1
88	1	9	TYR	HE1	H	6.818	0.007	1
89	1	9	TYR	HE2	H	6.818	0.007	1
90	1	9	TYR	CA	C	57.227	0.076	1
91	1	9	TYR	CB	C	39.182	0.076	1
92	1	9	TYR	CD1	C	133.147	0.026	1
93	1	9	TYR	CD2	C	133.147	0.026	1
94	1	9	TYR	CE1	C	118.431	0.073	1
95	1	9	TYR	CE2	C	118.431	0.073	1
96	1	9	TYR	N	N	120.533	0.051	1
97	1	10	VAL	H	H	7.844	0.01	1
98	1	10	VAL	HA	H	4.045	0.003	1
99	1	10	VAL	HB	H	1.530	0.005	1
100	1	10	VAL	HG11	H	0.624	0.008	2
101	1	10	VAL	HG12	H	0.624	0.008	2
102	1	10	VAL	HG13	H	0.624	0.008	2
103	1	10	VAL	HG21	H	0.634	0.009	2
104	1	10	VAL	HG22	H	0.634	0.009	2
105	1	10	VAL	HG23	H	0.634	0.009	2
106	1	10	VAL	CA	C	59.487	0.04	1
107	1	10	VAL	CB	C	35.215	0.036	1
108	1	10	VAL	CG1	C	19.304	0.029	2
109	1	10	VAL	CG2	C	21.282	0.031	2
110	1	10	VAL	N	N	114.914	0.04	1
111	1	11	CYS	H	H	7.532	0.01	1
112	1	11	CYS	HA	H	3.871	0.007	1
113	1	11	CYS	HB2	H	1.967	0.006	2
114	1	11	CYS	HB3	H	3.524	0.005	2
115	1	11	CYS	CA	C	58.132	0.059	1
116	1	11	CYS	CB	C	31.882	0.034	1
117	1	11	CYS	N	N	124.918	0.04	1
118	1	12	MET	H	H	8.666	0.007	1
119	1	12	MET	HA	H	4.240	0.008	1
120	1	12	MET	HB2	H	1.386	0.005	2
121	1	12	MET	HB3	H	1.762	0.008	2
122	1	12	MET	HG2	H	2.375	0.006	2
123	1	12	MET	HG3	H	2.614	0.006	2
124	1	12	MET	HE1	H	2.085	0.007	1
125	1	12	MET	HE2	H	2.085	0.007	1
126	1	12	MET	HE3	H	2.085	0.007	1
127	1	12	MET	CA	C	56.352	0.059	1
128	1	12	MET	CB	C	31.581	0.076	1
129	1	12	MET	CG	C	32.571	0.075	1
130	1	12	MET	CE	C	16.941	0.03	1
131	1	12	MET	N	N	127.888	0.021	1
132	1	13	PHE	H	H	8.935	0.012	1
133	1	13	PHE	HA	H	4.993	0.004	1
134	1	13	PHE	HB2	H	3.414	0.004	2
135	1	13	PHE	HB3	H	3.240	0.004	2
136	1	13	PHE	HD1	H	7.564	0.005	1
137	1	13	PHE	HD2	H	7.564	0.005	1
138	1	13	PHE	HE1	H	7.526	0.002	1
139	1	13	PHE	HE2	H	7.526	0.002	1
140	1	13	PHE	HZ	H	7.437	0.004	1
141	1	13	PHE	CA	C	59.129	0.041	1
142	1	13	PHE	CB	C	40.654	0.028	1
143	1	13	PHE	CD1	C	131.624	0.072	1
144	1	13	PHE	CD2	C	131.624	0.072	1
145	1	13	PHE	CE1	C	131.004		1
146	1	13	PHE	CE2	C	131.004		1
147	1	13	PHE	CZ	C	129.928	0.037	1
148	1	13	PHE	N	N	120.159	0.03	1
149	1	14	CYS	H	H	8.491	0.011	1
150	1	14	CYS	HA	H	4.900	0.003	1
151	1	14	CYS	HB2	H	3.399	0.007	2
152	1	14	CYS	HB3	H	3.400	0.008	2
153	1	14	CYS	CA	C	59.085	0.074	1
154	1	14	CYS	CB	C	31.435	0.071	1
155	1	14	CYS	N	N	117.765	0.036	1
156	1	15	GLY	H	H	8.051	0.01	1
157	1	15	GLY	HA2	H	3.855	0.01	2
158	1	15	GLY	HA3	H	4.070	0.008	2
159	1	15	GLY	CA	C	46.505	0.065	1
160	1	15	GLY	N	N	112.169	0.035	1
161	1	16	ARG	H	H	8.525	0.009	1
162	1	16	ARG	HA	H	4.818	0.005	1
163	1	16	ARG	HB2	H	2.145	0.003	2
164	1	16	ARG	HB3	H	2.287	0.003	2
165	1	16	ARG	HG2	H	1.691	0.005	2
166	1	16	ARG	HG3	H	1.858	0.008	2
167	1	16	ARG	HD2	H	3.292	0.005	2
168	1	16	ARG	HD3	H	3.292	0.005	2
169	1	16	ARG	CA	C	55.193	0.032	1
170	1	16	ARG	CB	C	33.341	0.026	1
171	1	16	ARG	CG	C	27.472	0.026	1
172	1	16	ARG	CD	C	43.258	0.029	1
173	1	16	ARG	N	N	119.286	0.02	1
174	1	17	GLY	H	H	8.965	0.006	1
175	1	17	GLY	HA2	H	3.755	0.01	2
176	1	17	GLY	HA3	H	4.690	0.001	2
177	1	17	GLY	CA	C	44.617	0.059	1
178	1	17	GLY	N	N	109.404	0.03	1
179	1	18	ASN	H	H	7.728	0.01	1
180	1	18	ASN	HA	H	4.858	0.003	1
181	1	18	ASN	HB2	H	3.207	0.002	2
182	1	18	ASN	HB3	H	3.023	0.007	2
183	1	18	ASN	CA	C	52.203	0.051	1
184	1	18	ASN	CB	C	37.631	0.021	1
185	1	18	ASN	N	N	115.364	0.03	1
186	1	19	ASN	H	H	9.236	0.009	1
187	1	19	ASN	HA	H	4.457	0.007	1
188	1	19	ASN	HB2	H	2.986	0.007	2
189	1	19	ASN	HB3	H	2.672	0.005	2
190	1	19	ASN	CA	C	55.330	0.046	1
191	1	19	ASN	CB	C	38.482	0.043	1
192	1	19	ASN	N	N	115.914	0.042	1
193	1	20	GLU	H	H	9.823	0.014	1
194	1	20	GLU	HA	H	3.870	0.006	1
195	1	20	GLU	HB2	H	2.186	0.004	2
196	1	20	GLU	HB3	H	2.037	0.011	2
197	1	20	GLU	HG2	H	2.451	0.008	2
198	1	20	GLU	HG3	H	2.451	0.008	2
199	1	20	GLU	CA	C	60.413	0.065	1
200	1	20	GLU	CB	C	28.515	0.045	1
201	1	20	GLU	CG	C	36.331	0.025	1
202	1	20	GLU	N	N	117.252	0.033	1
203	1	21	ASP	H	H	9.160	0.008	1
204	1	21	ASP	HA	H	4.449	0.006	1
205	1	21	ASP	HB2	H	2.771	0.005	2
206	1	21	ASP	HB3	H	2.771	0.005	2
207	1	21	ASP	CA	C	55.271	0.071	1
208	1	21	ASP	CB	C	39.071	0.028	1
209	1	21	ASP	N	N	117.934	0.029	1
210	1	22	LYS	H	H	8.171	0.01	1
211	1	22	LYS	HA	H	4.429	0.005	1
212	1	22	LYS	HB2	H	2.909	0.005	2
213	1	22	LYS	HB3	H	1.756	0.005	2
214	1	22	LYS	HG2	H	1.409	0.008	2
215	1	22	LYS	HG3	H	1.567	0.003	2
216	1	22	LYS	HD2	H	1.664	0.005	2
217	1	22	LYS	HD3	H	1.763	0.006	2
218	1	22	LYS	HE2	H	3.050	0.007	2
219	1	22	LYS	HE3	H	3.050	0.007	2
220	1	22	LYS	CA	C	54.392	0.018	1
221	1	22	LYS	CB	C	32.731	0.021	1
222	1	22	LYS	CG	C	25.223	0.08	1
223	1	22	LYS	CD	C	28.750	0.039	1
224	1	22	LYS	CE	C	42.577	0.071	1
225	1	22	LYS	N	N	118.558	0.03	1
226	1	23	LEU	H	H	7.272	0.007	1
227	1	23	LEU	HA	H	4.176	0.014	1
228	1	23	LEU	HB2	H	1.372	0.004	2
229	1	23	LEU	HB3	H	1.580	0.003	2
230	1	23	LEU	HG	H	1.225	0.007	1
231	1	23	LEU	HD11	H	0.307	0.011	2
232	1	23	LEU	HD12	H	0.307	0.011	2
233	1	23	LEU	HD13	H	0.307	0.011	2
234	1	23	LEU	HD21	H	0.309	0.01	2
235	1	23	LEU	HD22	H	0.309	0.01	2
236	1	23	LEU	HD23	H	0.309	0.01	2
237	1	23	LEU	CA	C	54.730	0.052	1
238	1	23	LEU	CB	C	43.098	0.072	1
239	1	23	LEU	CG	C	26.500	0.055	1
240	1	23	LEU	CD1	C	24.363	0.052	2
241	1	23	LEU	CD2	C	24.369	0.048	2
242	1	23	LEU	N	N	121.480	0.03	1
243	1	24	LEU	H	H	8.734	0.009	1
244	1	24	LEU	HA	H	4.226	0.006	1
245	1	24	LEU	HB2	H	0.616	0.004	2
246	1	24	LEU	HB3	H	1.033	0.004	2
247	1	24	LEU	HG	H	1.179	0.006	1
248	1	24	LEU	HD11	H	-0.383	0.007	2
249	1	24	LEU	HD12	H	-0.383	0.007	2
250	1	24	LEU	HD13	H	-0.383	0.007	2
251	1	24	LEU	HD21	H	0.243	0.003	2
252	1	24	LEU	HD22	H	0.243	0.003	2
253	1	24	LEU	HD23	H	0.243	0.003	2
254	1	24	LEU	CA	C	53.582	0.044	1
255	1	24	LEU	CB	C	43.394	0.054	1
256	1	24	LEU	CG	C	25.898	0.047	1
257	1	24	LEU	CD1	C	24.817	0.069	2
258	1	24	LEU	CD2	C	23.863	0.07	2
259	1	24	LEU	N	N	126.922	0.045	1
260	1	25	LEU	H	H	8.127	0.007	1
261	1	25	LEU	HA	H	4.740	0.006	1
262	1	25	LEU	HB2	H	1.215	0.005	2
263	1	25	LEU	HB3	H	1.523	0.003	2
264	1	25	LEU	HG	H	1.307	0.005	1
265	1	25	LEU	HD11	H	0.602	0.008	2
266	1	25	LEU	HD12	H	0.602	0.008	2
267	1	25	LEU	HD13	H	0.602	0.008	2
268	1	25	LEU	HD21	H	0.587	0.007	2
269	1	25	LEU	HD22	H	0.587	0.007	2
270	1	25	LEU	HD23	H	0.587	0.007	2
271	1	25	LEU	CA	C	53.396	0.065	1
272	1	25	LEU	CB	C	43.810	0.056	1
273	1	25	LEU	CG	C	27.337	0.055	1
274	1	25	LEU	CD1	C	24.007	0.052	2
275	1	25	LEU	CD2	C	25.148	0.053	2
276	1	25	LEU	N	N	122.828	0.05	1
277	1	26	CYS	H	H	9.116	0.007	1
278	1	26	CYS	HA	H	4.657	0.008	1
279	1	26	CYS	HB2	H	2.937	0.005	2
280	1	26	CYS	HB3	H	3.539	0.004	2
281	1	26	CYS	CA	C	60.355	0.053	1
282	1	26	CYS	CB	C	30.929	0.06	1
283	1	26	CYS	N	N	128.035	0.045	1
284	1	27	ASP	H	H	9.231	0.005	1
285	1	27	ASP	CA	C	56.990	0.018	1
286	1	27	ASP	CB	C	41.929	0.023	1
287	1	27	ASP	N	N	129.838	0.043	1
288	1	28	GLY	H	H	9.999	0.013	1
289	1	28	GLY	HA2	H	4.048	0.009	2
290	1	28	GLY	HA3	H	4.155	0.007	2
291	1	28	GLY	CA	C	46.202	0.069	1
292	1	28	GLY	N	N	112.767	0.054	1
293	1	29	CYS	H	H	8.025	0.014	1
294	1	29	CYS	CA	C	58.532	0.018	1
295	1	29	CYS	CB	C	32.802		1
296	1	29	CYS	N	N	120.999	0.053	1
297	1	30	ASP	H	H	8.164	0.006	1
298	1	30	ASP	HA	H	4.705	0.007	1
299	1	30	ASP	HB2	H	3.121	0.01	2
300	1	30	ASP	HB3	H	2.821	0.008	2
301	1	30	ASP	CA	C	56.408	0.032	1
302	1	30	ASP	CB	C	41.417	0.072	1
303	1	30	ASP	N	N	119.080	0.052	1
304	1	31	ASP	H	H	8.794	0.013	1
305	1	31	ASP	HA	H	4.808	0.007	1
306	1	31	ASP	HB2	H	3.116	0.013	2
307	1	31	ASP	HB3	H	2.609	0.008	2
308	1	31	ASP	CA	C	55.740	0.067	1
309	1	31	ASP	CB	C	42.413	0.056	1
310	1	31	ASP	N	N	122.738	0.028	1
311	1	32	SER	H	H	8.029	0.011	1
312	1	32	SER	HA	H	5.893	0.013	1
313	1	32	SER	HB2	H	3.409	0.003	1
314	1	32	SER	HB3	H	3.409	0.003	1
315	1	32	SER	CA	C	56.550	0.049	1
316	1	32	SER	CB	C	66.266	0.052	1
317	1	32	SER	N	N	113.237	0.049	1
318	1	33	TYR	H	H	8.526	0.005	1
319	1	33	TYR	HA	H	5.475	0.003	1
320	1	33	TYR	HB2	H	2.780	0.007	2
321	1	33	TYR	HB3	H	2.520	0.01	2
322	1	33	TYR	HD1	H	6.989	0.007	1
323	1	33	TYR	HD2	H	6.989	0.007	1
324	1	33	TYR	HE1	H	6.616	0.005	1
325	1	33	TYR	HE2	H	6.616	0.005	1
326	1	33	TYR	CA	C	56.477	0.052	1
327	1	33	TYR	CB	C	44.558	0.035	1
328	1	33	TYR	CD1	C	133.299	0.049	1
329	1	33	TYR	CD2	C	133.299	0.049	1
330	1	33	TYR	CE1	C	117.730	0.062	1
331	1	33	TYR	CE2	C	117.730	0.062	1
332	1	33	TYR	N	N	118.397	0.035	1
333	1	34	HIS	H	H	9.124	0.008	1
334	1	34	HIS	HA	H	5.060	0.004	1
335	1	34	HIS	HB2	H	1.343	0.006	2
336	1	34	HIS	HB3	H	3.075	0.002	2
337	1	34	HIS	HD2	H	6.697	0.007	1
338	1	34	HIS	HE1	H	7.511	0.007	1
339	1	34	HIS	CA	C	57.896	0.053	1
340	1	34	HIS	CB	C	30.643	0.066	1
341	1	34	HIS	CD2	C	118.106	0.027	1
342	1	34	HIS	CE1	C	138.969	0.028	1
343	1	34	HIS	N	N	121.296	0.049	1
344	1	35	THR	H	H	8.885	0.011	1
345	1	35	THR	HA	H	3.623	0.006	1
346	1	35	THR	HB	H	4.412	0.007	1
347	1	35	THR	HG21	H	1.137	0.009	1
348	1	35	THR	HG22	H	1.137	0.009	1
349	1	35	THR	HG23	H	1.137	0.009	1
350	1	35	THR	CA	C	65.007	0.021	1
351	1	35	THR	CB	C	66.123	0.037	1
352	1	35	THR	CG2	C	23.776	0.02	1
353	1	35	THR	N	N	113.413	0.032	1
354	1	36	PHE	H	H	6.513	0.005	1
355	1	36	PHE	HA	H	4.730	0.005	1
356	1	36	PHE	HB2	H	2.981	0.003	2
357	1	36	PHE	HB3	H	3.579	0.004	2
358	1	36	PHE	HD1	H	7.254	0.006	1
359	1	36	PHE	HD2	H	7.254	0.006	1
360	1	36	PHE	HE1	H	7.017	0.007	1
361	1	36	PHE	HE2	H	7.017	0.007	1
362	1	36	PHE	HZ	H	6.370	0.007	1
363	1	36	PHE	CA	C	56.219	0.051	1
364	1	36	PHE	CB	C	37.462	0.028	1
365	1	36	PHE	CD1	C	132.847	0.042	1
366	1	36	PHE	CD2	C	132.847	0.042	1
367	1	36	PHE	CE1	C	131.910	0.067	1
368	1	36	PHE	CE2	C	131.910	0.067	1
369	1	36	PHE	CZ	C	129.939	0.068	1
370	1	36	PHE	N	N	111.308	0.027	1
371	1	37	CYS	H	H	7.525	0.01	1
372	1	37	CYS	HA	H	4.400	0.003	1
373	1	37	CYS	HB2	H	2.913	0.007	2
374	1	37	CYS	HB3	H	3.464	0.003	2
375	1	37	CYS	CA	C	61.629	0.061	1
376	1	37	CYS	CB	C	31.519	0.068	1
377	1	37	CYS	N	N	123.557	0.045	1
378	1	38	LEU	H	H	6.500	0.009	1
379	1	38	LEU	HA	H	4.105	0.003	1
380	1	38	LEU	HB2	H	1.455	0.004	2
381	1	38	LEU	HB3	H	1.758	0.008	2
382	1	38	LEU	HG	H	1.833	0.01	1
383	1	38	LEU	HD11	H	0.707	0.004	2
384	1	38	LEU	HD12	H	0.707	0.004	2
385	1	38	LEU	HD13	H	0.707	0.004	2
386	1	38	LEU	HD21	H	0.881	0.008	2
387	1	38	LEU	HD22	H	0.881	0.008	2
388	1	38	LEU	HD23	H	0.881	0.008	2
389	1	38	LEU	CA	C	55.048	0.029	1
390	1	38	LEU	CB	C	44.212	0.031	1
391	1	38	LEU	CG	C	27.016	0.025	1
392	1	38	LEU	CD1	C	23.156	0.074	2
393	1	38	LEU	CD2	C	27.007	0.043	2
394	1	38	LEU	N	N	119.781	0.03	1
395	1	39	ILE	H	H	8.129	0.005	1
396	1	39	ILE	HA	H	4.253	0.003	1
397	1	39	ILE	HB	H	1.731	0.005	1
398	1	39	ILE	HG12	H	0.874	0.004	2
399	1	39	ILE	HG13	H	1.388	0.002	2
400	1	39	ILE	HG21	H	0.819	0.003	1
401	1	39	ILE	HG22	H	0.819	0.003	1
402	1	39	ILE	HG23	H	0.819	0.003	1
403	1	39	ILE	HD11	H	0.781	0.004	1
404	1	39	ILE	HD12	H	0.781	0.004	1
405	1	39	ILE	HD13	H	0.781	0.004	1
406	1	39	ILE	CA	C	57.824	0.006	1
407	1	39	ILE	CB	C	40.006	0.02	1
408	1	39	ILE	CG1	C	26.913	0.031	1
409	1	39	ILE	CG2	C	17.191	0.023	1
410	1	39	ILE	CD1	C	13.337	0.015	1
411	1	39	ILE	N	N	118.612	0.019	1
412	1	40	PRO	HA	H	5.041	0.005	1
413	1	40	PRO	HB2	H	2.073	0.008	2
414	1	40	PRO	HB3	H	2.459	0.002	2
415	1	40	PRO	HG2	H	1.919	0.013	2
416	1	40	PRO	HG3	H	1.962	0.011	2
417	1	40	PRO	HD2	H	3.523	0.003	2
418	1	40	PRO	HD3	H	3.685	0.009	2
419	1	40	PRO	CA	C	62.193	0.007	1
420	1	40	PRO	CB	C	33.072	0.06	1
421	1	40	PRO	CG	C	24.843	0.014	1
422	1	40	PRO	CD	C	49.986	0.027	1
423	1	41	PRO	HA	H	4.363	0.003	1
424	1	41	PRO	HB2	H	2.012	0.004	2
425	1	41	PRO	HB3	H	2.267	0.004	2
426	1	41	PRO	HG2	H	2.084	0.004	1
427	1	41	PRO	HG3	H	2.084	0.004	1
428	1	41	PRO	HD2	H	3.861	0.009	2
429	1	41	PRO	HD3	H	3.914	0.013	2
430	1	41	PRO	CA	C	63.940	0.035	1
431	1	41	PRO	CB	C	32.000	0.052	1
432	1	41	PRO	CG	C	26.956	0.038	1
433	1	41	PRO	CD	C	50.661	0.074	1
434	1	42	LEU	H	H	7.250	0.011	1
435	1	42	LEU	HA	H	4.825	0.005	1
436	1	42	LEU	HB2	H	1.631	0.004	2
437	1	42	LEU	HB3	H	1.400	0.006	2
438	1	42	LEU	HG	H	1.812	0.011	1
439	1	42	LEU	HD11	H	0.797	0.008	2
440	1	42	LEU	HD12	H	0.797	0.008	2
441	1	42	LEU	HD13	H	0.797	0.008	2
442	1	42	LEU	HD21	H	0.940	0.004	2
443	1	42	LEU	HD22	H	0.940	0.004	2
444	1	42	LEU	HD23	H	0.940	0.004	2
445	1	42	LEU	CA	C	51.798	0.024	1
446	1	42	LEU	CB	C	43.060	0.068	1
447	1	42	LEU	CG	C	27.132	0.039	1
448	1	42	LEU	CD1	C	25.828	0.035	2
449	1	42	LEU	CD2	C	23.027	0.007	2
450	1	42	LEU	N	N	114.667	0.039	1
451	1	43	PRO	HA	H	4.445	0.008	1
452	1	43	PRO	HB2	H	1.898	0.008	2
453	1	43	PRO	HB3	H	2.257	0.007	2
454	1	43	PRO	HG2	H	2.138	0.003	2
455	1	43	PRO	HG3	H	2.005	0.005	2
456	1	43	PRO	HD2	H	3.693	0.008	2
457	1	43	PRO	HD3	H	3.692	0.007	2
458	1	43	PRO	CA	C	62.836	0.024	1
459	1	43	PRO	CB	C	32.127	0.07	1
460	1	43	PRO	CG	C	27.347	0.045	1
461	1	43	PRO	CD	C	49.938	0.042	1
462	1	44	ASP	H	H	7.660	0.009	1
463	1	44	ASP	HA	H	4.728	0.004	1
464	1	44	ASP	HB2	H	2.545	0.005	2
465	1	44	ASP	HB3	H	2.546	0.002	2
466	1	44	ASP	CA	C	51.837	0.074	1
467	1	44	ASP	CB	C	43.421	0.034	1
468	1	44	ASP	N	N	121.642	0.029	1
469	1	45	VAL	H	H	8.768	0.011	1
470	1	45	VAL	HA	H	3.892	0.007	1
471	1	45	VAL	HB	H	1.988	0.005	1
472	1	45	VAL	HG11	H	0.926	0.008	2
473	1	45	VAL	HG12	H	0.926	0.008	2
474	1	45	VAL	HG13	H	0.926	0.008	2
475	1	45	VAL	HG21	H	0.994	0.007	2
476	1	45	VAL	HG22	H	0.994	0.007	2
477	1	45	VAL	HG23	H	0.994	0.007	2
478	1	45	VAL	CA	C	60.726	0.051	1
479	1	45	VAL	CB	C	32.395	0.027	1
480	1	45	VAL	CG1	C	20.677	0.011	2
481	1	45	VAL	CG2	C	21.612	0.023	2
482	1	45	VAL	N	N	121.970	0.032	1
483	1	46	PRO	HA	H	4.461	0.005	1
484	1	46	PRO	HB2	H	1.989	0.005	2
485	1	46	PRO	HB3	H	2.356	0.006	2
486	1	46	PRO	HG2	H	1.854	0.006	2
487	1	46	PRO	HG3	H	1.918	0.007	2
488	1	46	PRO	HD2	H	3.462	0.01	2
489	1	46	PRO	HD3	H	3.748	0.006	2
490	1	46	PRO	CA	C	62.840	0.042	1
491	1	46	PRO	CB	C	32.255	0.063	1
492	1	46	PRO	CG	C	27.089	0.056	1
493	1	46	PRO	CD	C	51.378	0.016	1
494	1	47	LYS	H	H	8.530	0.005	1
495	1	47	LYS	HA	H	4.359	0.002	1
496	1	47	LYS	HB2	H	1.772	0.004	2
497	1	47	LYS	HB3	H	1.880	0.005	2
498	1	47	LYS	HG2	H	1.473	0.004	2
499	1	47	LYS	HG3	H	1.552	0.007	2
500	1	47	LYS	HD2	H	1.702	0.006	1
501	1	47	LYS	HD3	H	1.702	0.006	1
502	1	47	LYS	HE2	H	3.038	0.008	2
503	1	47	LYS	HE3	H	3.038	0.009	2
504	1	47	LYS	CA	C	56.044	0.019	1
505	1	47	LYS	CB	C	32.748	0.046	1
506	1	47	LYS	CG	C	25.043	0.062	1
507	1	47	LYS	CD	C	28.777	0.055	1
508	1	47	LYS	CE	C	42.313	0.055	1
509	1	47	LYS	N	N	121.227	0.026	1
510	1	48	GLY	H	H	8.155	0.007	1
511	1	48	GLY	HA2	H	4.001	0.009	2
512	1	48	GLY	HA3	H	4.053	0.008	2
513	1	48	GLY	CA	C	44.633	0.073	1
514	1	48	GLY	N	N	109.848	0.007	1
515	1	49	ASP	H	H	8.301	0.007	1
516	1	49	ASP	HA	H	4.671	0.007	1
517	1	49	ASP	HB2	H	2.561	0.005	2
518	1	49	ASP	HB3	H	2.644	0.003	2
519	1	49	ASP	CA	C	54.713	0.063	1
520	1	49	ASP	CB	C	41.445	0.068	1
521	1	49	ASP	N	N	121.467	0.035	1
522	1	50	TRP	H	H	9.249	0.014	1
523	1	50	TRP	HA	H	4.462	0.008	1
524	1	50	TRP	HB2	H	3.054	0.009	2
525	1	50	TRP	HB3	H	3.226	0.008	2
526	1	50	TRP	HE1	H	12.022	0.011	1
527	1	50	TRP	HE3	H	7.264	0.006	1
528	1	50	TRP	HZ2	H	7.190	0.005	1
529	1	50	TRP	HZ3	H	6.802	0.005	1
530	1	50	TRP	HH2	H	6.711	0.006	1
531	1	50	TRP	CA	C	59.946	0.027	1
532	1	50	TRP	CB	C	30.322	0.072	1
533	1	50	TRP	CD1	C	125.920		1
534	1	50	TRP	CE3	C	121.271	0.072	1
535	1	50	TRP	CZ2	C	114.886	0.026	1
536	1	50	TRP	CZ3	C	120.129	0.038	1
537	1	50	TRP	CH2	C	122.265	0.047	1
538	1	50	TRP	N	N	125.718	0.016	1
539	1	50	TRP	NE1	N	141.38	0.057	1
540	1	51	ARG	H	H	6.551	0.012	1
541	1	51	ARG	HA	H	4.981	0.013	1
542	1	51	ARG	HB2	H	1.227	0.006	2
543	1	51	ARG	HB3	H	1.227	0.006	2
544	1	51	ARG	HG2	H	1.363	0.005	2
545	1	51	ARG	HG3	H	1.555	0.004	2
546	1	51	ARG	HD2	H	3.003	0.007	2
547	1	51	ARG	HD3	H	3.003	0.007	2
548	1	51	ARG	CA	C	52.706	0.078	1
549	1	51	ARG	CB	C	33.803	0.068	1
550	1	51	ARG	CG	C	27.825	0.074	1
551	1	51	ARG	CD	C	43.277	0.05	1
552	1	51	ARG	N	N	124.312	0.036	1
553	1	52	CYS	H	H	9.208	0.013	1
554	1	52	CYS	HA	H	3.749	0.004	1
555	1	52	CYS	HB2	H	2.494	0.007	2
556	1	52	CYS	HB3	H	3.215	0.007	2
557	1	52	CYS	CA	C	57.155	0.066	1
558	1	52	CYS	CB	C	29.549	0.067	1
559	1	52	CYS	N	N	126.476	0.046	1
560	1	53	PRO	HA	H	4.095	0.003	1
561	1	53	PRO	HB2	H	1.866	0.014	2
562	1	53	PRO	HB3	H	2.399	0.005	2
563	1	53	PRO	HG2	H	1.979	0.008	2
564	1	53	PRO	HG3	H	1.980	0.008	2
565	1	53	PRO	HD2	H	3.134	0.011	2
566	1	53	PRO	HD3	H	3.376	0.007	2
567	1	53	PRO	CA	C	65.384	0.067	1
568	1	53	PRO	CB	C	32.214	0.058	1
569	1	53	PRO	CG	C	28.084	0.047	1
570	1	53	PRO	CD	C	49.925	0.047	1
571	1	54	LYS	H	H	8.076	0.012	1
572	1	54	LYS	HA	H	4.164	0.004	1
573	1	54	LYS	HB2	H	1.943	0.004	2
574	1	54	LYS	HB3	H	1.943	0.004	2
575	1	54	LYS	HG2	H	1.391	0.007	2
576	1	54	LYS	HG3	H	1.579	0.006	2
577	1	54	LYS	HD2	H	1.761	0.015	2
578	1	54	LYS	HD3	H	1.786	0.014	2
579	1	54	LYS	HE2	H	3.061	0.011	2
580	1	54	LYS	HE3	H	3.077	0.01	2
581	1	54	LYS	CA	C	59.045	0.015	1
582	1	54	LYS	CB	C	32.903	0.021	1
583	1	54	LYS	CG	C	25.007	0.07	1
584	1	54	LYS	CD	C	29.131	0.067	1
585	1	54	LYS	CE	C	42.101	0.045	1
586	1	54	LYS	N	N	118.795	0.046	1
587	1	55	CYS	H	H	8.166	0.009	1
588	1	55	CYS	HA	H	3.950	0.002	1
589	1	55	CYS	HB2	H	2.725	0.008	2
590	1	55	CYS	HB3	H	2.838	0.006	2
591	1	55	CYS	CA	C	64.215	0.042	1
592	1	55	CYS	CB	C	29.361	0.054	1
593	1	55	CYS	N	N	122.838	0.025	1
594	1	56	VAL	H	H	7.972	0.009	1
595	1	56	VAL	HA	H	3.736	0.007	1
596	1	56	VAL	HB	H	1.904	0.005	1
597	1	56	VAL	HG11	H	0.776	0.003	2
598	1	56	VAL	HG12	H	0.776	0.003	2
599	1	56	VAL	HG13	H	0.776	0.003	2
600	1	56	VAL	HG21	H	0.776	0.003	2
601	1	56	VAL	HG22	H	0.776	0.003	2
602	1	56	VAL	HG23	H	0.776	0.003	2
603	1	56	VAL	CA	C	64.032	0.053	1
604	1	56	VAL	CB	C	31.881	0.065	1
605	1	56	VAL	CG1	C	21.441	0.063	2
606	1	56	VAL	CG2	C	21.416	0.056	2
607	1	56	VAL	N	N	118.379	0.047	1
608	1	57	ALA	H	H	7.521	0.013	1
609	1	57	ALA	HA	H	4.257	0.003	1
610	1	57	ALA	HB1	H	1.431	0.005	1
611	1	57	ALA	HB2	H	1.431	0.005	1
612	1	57	ALA	HB3	H	1.431	0.005	1
613	1	57	ALA	CA	C	52.879	0.032	1
614	1	57	ALA	CB	C	19.089	0.019	1
615	1	57	ALA	N	N	123.303	0.057	1
616	1	58	GLU	H	H	7.852	0.014	1
617	1	58	GLU	HA	H	4.258	0.004	1
618	1	58	GLU	HB2	H	1.936	0.003	2
619	1	58	GLU	HB3	H	2.105	0.003	2
620	1	58	GLU	HG2	H	2.253	0.005	2
621	1	58	GLU	HG3	H	2.350	0.004	2
622	1	58	GLU	CA	C	56.438	0.066	1
623	1	58	GLU	CB	C	30.397	0.046	1
624	1	58	GLU	CG	C	36.372	0.059	1
625	1	58	GLU	N	N	119.214	0.055	1
626	1	59	GLU	H	H	7.800	0.012	1
627	1	59	GLU	HA	H	4.066	0.002	1
628	1	59	GLU	HB2	H	1.912	0.008	2
629	1	59	GLU	HB3	H	2.021	0.002	2
630	1	59	GLU	HG2	H	2.229	0.005	1
631	1	59	GLU	HG3	H	2.229	0.005	1
632	1	59	GLU	CA	C	58.349	0.075	1
633	1	59	GLU	CB	C	31.127	0.052	1
634	1	59	GLU	CG	C	36.779	0.058	1
635	1	59	GLU	N	N	126.630	0.04	1

Release date

2020-12-08

Citation

Recognition of Histone H3 Methylation States by the PHD1 Domain of Histone Demethylase KDM5A
Longbotham, J.E., Kelly, M.J.S., Fujimori, D.G.
ACS Chem. Biol. (2021), 18, 1915-1925, PubMed 33621062 , DOI 10.1021/acschembio.0c00976 , Abstract

Related entities 1. Lysine-specific demethylase 5A (E.C.1.14.11.67), entity 1, : 1 : 1 : 6 : 206 entities Detail

Interaction partners 1. Lysine-specific demethylase 5A (E.C.1.14.11.67), entity 1, : 13 interactors Detail

Experiments performed 8 experiments Detail