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BMRB: 34262

6GDK

Calcium bound form of human calmodulin mutant F141L

Authors

Grachov, O., Holt, C., Overgaard, M.T., Wimmer, R.

Assembly

Calmodulin-1

Entity

1. Calmodulin-1, entity 1 (polymer, Thiol state: not present), 148 monomers, 16672.20 Da Detail

ADQLTEEQIA EFKEAFSLFD KDGDGTITTK ELGTVMRSLG QNPTEAELQD MINEVDADGN GTIDFPEFLT MMARKMKDTD SEEEIREAFR VFDKDGNGYI SAAELRHVMT NLGEKLTDEE VDEMIREADI DGDGQVNYEE LVQMMTAK

2. Calmodulin-1, entity CA (non-polymer), 40.078 × 4 Da

Total weight

16832.512 Da

Max. entity weight

16672.2 Da

Source organism

Homo sapiens

Exptl. method

solution NMR

Data set

assigned_chemical_shifts, heteronucl_NOEs, heteronucl_T1_relaxation, heteronucl_T2_relaxation

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 84.0 %, Completeness (bb): 98.6 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	84.0 % (1400 of 1666)	75.1 % (650 of 865)	93.0 % (598 of 643)	96.2 % (152 of 158)
Backbone	98.6 % (872 of 884)	97.4 % (297 of 305)	99.5 % (431 of 433)	98.6 % (144 of 146)
Sidechain	72.4 % (665 of 919)	63.0 % (353 of 560)	87.6 % (304 of 347)	66.7 % (8 of 12)
Aromatic	22.2 % (20 of 90)	6.7 % (3 of 45)	37.8 % (17 of 45)
Methyl	99.3 % (145 of 146)	98.6 % (72 of 73)	100.0 % (73 of 73)

1. entity 1

ADQLTEEQIA EFKEAFSLFD KDGDGTITTK ELGTVMRSLG QNPTEAELQD MINEVDADGN GTIDFPEFLT MMARKMKDTD SEEEIREAFR VFDKDGNGYI SAAELRHVMT NLGEKLTDEE VDEMIREADI DGDGQVNYEE LVQMMTAK

Show sample condition

Sample

Solvent system 95% H2O/5% D2O, Pressure 1 bar, Temperature 298.1 K, pH 6.45, Details 0.53 mM [U-13C; U-15N] Calmodulin mutant F141L, 10 mM NA calcium chloride, 10 mM NA potassium chloride, 2 mM NA HEPES, 2 mM NA sodium azide, 0.1 mM NA TSP-d4, 95% H2O/5% D2O

#	Name	Isotope labeling	Concentration
1	Calmodulin mutant F141L	[U-13C; U-15N]	0.53 mM
2	calcium chloride	NA	10 mM
3	potassium chloride	NA	10 mM
4	HEPES	NA	2 mM
5	sodium azide	NA	2 mM
6	TSP	NA	0.1 mM

LACS Plot; CA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	TSP-d4	methyl protons	internal	indirect	0.2514495
¹H	TSP	methyl protons	internal	direct	1.0
¹⁵N	TSP-d4	methyl protons	internal	indirect	0.1013291

Referencing offset: 0.27 ppm, Outliers: 1 Detail

LACS Plot; CB

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	TSP-d4	methyl protons	internal	indirect	0.2514495
¹H	TSP	methyl protons	internal	direct	1.0
¹⁵N	TSP-d4	methyl protons	internal	indirect	0.1013291

Referencing offset: 0.27 ppm, Outliers: 1 Detail

LACS Plot; HA

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	TSP-d4	methyl protons	internal	indirect	0.2514495
¹H	TSP	methyl protons	internal	direct	1.0
¹⁵N	TSP-d4	methyl protons	internal	indirect	0.1013291

Referencing offset: -0.01 ppm, Outliers: 2 Detail

LACS Plot; CO

Atom type	Mol. common name	Atom group	Ref. method	Ref. type	Shift ratio
¹³C	TSP-d4	methyl protons	internal	indirect	0.2514495
¹H	TSP	methyl protons	internal	direct	1.0
¹⁵N	TSP-d4	methyl protons	internal	indirect	0.1013291

Referencing offset: -0.67 ppm, Outliers: 2 Detail

Heteronucl. T₁

143 T₁ values in 1 lists
Coherence Sz, Field strength (¹H) 600 MHz, Pressure 1 bar, Temperature 298.1 K, pH 6.45 Detail

Heteronucl. T₂

143 T₂ values in 1 lists
Coherence S(+,-), Field strength (¹H) 600 MHz, Pressure 1 bar, Temperature 298.1 K, pH 6.45 Detail

Heteronucl. NOE

143 NOE values in 1 lists
Value type peak height, Field strength (¹H) 600 MHz, Pressure 1 bar, Temperature 298.1 K, pH 6.45 Detail

Heteronucl. T₁/T₂

143 T₁/T₂ values in 1 lists
Field strength (¹H) 600 MHz, Pressure 1 bar, Temperature 298.1 K, pH 6.45 Detail

Release date

2018-10-09

Citation

Arrhythmia mutations in calmodulin cause conformational changes that affect interactions with the cardiac voltage-gated calcium channel
Wang, K., Holt, C., Lu, J., Brohus, M., Larsen, K.T., Overgaard, M.T., Wimmer, R., van Petegem, F.
Proc. Natl. Acad. Sci. U. S. A. (2018), 115, E10556-E10565, PubMed 30348784 , DOI 10.1073/pnas.1808733115 , Abstract

Related entities 1. Calmodulin-1, entity 1, : 1 : 3 : 111 : 181 entities Detail

Interaction partners 1. Calmodulin-1, entity 1, : 1 interactors Detail

More details for 1 interactors identified by 1 citations