Search

Solution NMR Structure of APP TMD
Authors
Silber, M., Muhle-Goll, C.
Assembly
Amyloid-beta precursor protein
Entity
1. Amyloid-beta precursor protein (polymer, Thiol state: not present), 30 monomers, 3122.996 Da Detail

SNKGAIIGLM VGLVVIATVI VITLVMLKKK


Formula weight
3122.996 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Refine. method
simulated annealing
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 75.6 %, Completeness (bb): 77.3 % Detail

Polymer type: polypeptide(L)

Total1H13C
All75.6 % (245 of 324)80.6 % (145 of 180)69.4 % (100 of 144)
Backbone77.3 % (116 of 150)96.8 % (61 of 63)63.2 % (55 of 87)
Sidechain76.1 % (153 of 201)71.8 % (84 of 117)82.1 % (69 of 84)
Methyl100.0 % (68 of 68)100.0 % (34 of 34)100.0 % (34 of 34)

1. entity 1

SNKGAIIGLM VGLVVIATVI VITLVMLKKK

Sample

Solvent system 80% TFE-d2, 20% H2O, Pressure 1 Pa, Temperature 298 K, pH 7.0, Details 500 uM APP G38L, 80% TFE-d2, 20% H2O


#NameIsotope labelingTypeConcentration
1APP G38Lnatural abundance500 uM

Protein Blocks Logo
Calculated from 20 models in PDB: 6YHI, Strand ID: A Detail


Release date
2020-04-19
Citation
Altered Hinge Conformations in APP Transmembrane Helix Mutants May Affect Enzyme-Substrate Interactions of γ-Secretase
Silber, M., Hitzenberger, M., Zacharias, M., Muhle-Goll, C.
ACS Chem. Neurosci. (2020), 11, 4426-4433, PubMed 33232115 , DOI 10.1021/acschemneuro.0c00640 ,
Entries sharing articles BMRB: 4 entries Detail
  BMRB: 34506 released on 2020-07-13
    Title Solution NMR Structure of APP TMD
  BMRB: 34508 released on 2020-07-13
    Title Solution NMR Structure of APP G38P mutant TM
  BMRB: 34509 released on 2020-04-22
    Title Solution NMR Structure of APP TMD V44M mutant
  BMRB: 34510 released on 2020-04-22
    Title Solution NMR Structure of APP TMD I45T mutant
Related entities 1. Amyloid-beta precursor protein, : 1 : 1 : 27 : 40 entities Detail
Interaction partners 1. Amyloid-beta precursor protein, : 94 interactors Detail
Experiments performed 1 experiments Detail
Chemical shift validation 3 contents Detail
Keywords APP, MEMBRANE PROTEIN, gamma secretase, transmembrane