Solution structure of antimicrobial peptide cathelicidin-1 PcDode from sperm whale Physeter catodon
ID | Type | Value order | Atom ID 1 | Atom ID 2 |
---|---|---|---|---|
1 | disulfide | sing | 1:CYS3:SG | 1:CYS23:SG |
2 | disulfide | sing | 1:CYS11:SG | 1:CYS15:SG |
Polymer type: polypeptide(L)
Total | 1H | 13C | |
---|---|---|---|
All | 79.8 % (202 of 253) | 88.1 % (126 of 143) | 69.1 % (76 of 110) |
Backbone | 67.5 % (77 of 114) | 86.7 % (39 of 45) | 55.1 % (38 of 69) |
Sidechain | 90.1 % (146 of 162) | 88.8 % (87 of 98) | 92.2 % (59 of 64) |
Methyl | 89.1 % (41 of 46) | 82.6 % (19 of 23) | 95.7 % (22 of 23) |
1. entity 1
XICRIIVVRV CRPICRITVI RVCSSolvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 313 K, pH 4.4, Details 0.6 mM PCdode, 5 % [U-100% 2H] D2O, 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | PCdode | natural abundance | 0.6 mM | |
2 | D2O | [U-100% 2H] | 5 % |