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Solution NMR structure of N-acetylglucosaminyltransferase V (GnTV) G22L mutant TMD
Authors
Silber, M., Muhle-Goll, C.
Assembly
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155)
Entity
1. Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155) (polymer, Thiol state: not present), 29 monomers, 3600.472 Da Detail

KKKLGFFLVT FLFIWGMMLL HFTIQQRKK


Formula weight
3600.472 Da
Source organism
Homo sapiens
Exptl. method
solution NMR
Data set
assigned_chemical_shifts
Chem. Shift Complete
Sequence coverage: 100.0 %, Completeness: 68.0 %, Completeness (bb): 76.4 % Detail

Polymer type: polypeptide(L)

Total1H13C15N
All68.0 % (283 of 416)70.6 % (154 of 218)60.6 % (100 of 165)87.9 % (29 of 33)
Backbone76.4 % (133 of 174)85.0 % (51 of 60)63.5 % (54 of 85)96.6 % (28 of 29)
Sidechain64.7 % (174 of 269)64.6 % (102 of 158)66.4 % (71 of 107)25.0 % (1 of 4)
Aromatic50.0 % (33 of 66)57.6 % (19 of 33)40.6 % (13 of 32)100.0 % (1 of 1)
Methyl77.8 % (28 of 36)77.8 % (14 of 18)77.8 % (14 of 18)

1. entity 1

KKKLGFFLVT FLFIWGMMLL HFTIQQRKK

Sample

Solvent system trifluoroethanol/water, Pressure 1 atm, Temperature 300 K, pH 7.0, Details 500 uM GNTV_G22L, trifluoroethanol/water


#NameIsotope labelingTypeConcentration
1GNTV_G22Lnatural abundance500 uM

Release date
2022-03-16
Citation
Helical stability of the GnTV transmembrane domain impacts on SPPL3 dependent cleavage
Papadopoulou, A.A., Stelzer, W., Silber, M., Schlosser, C., Spitz, C., Haug-Kroper, M., Straub, T., Muller, S.A., Lichtenthaler, S.F., Muhle-Goll, C., Langosch, D., Fluhrer, R.
Sci. Rep. (2022), 12, 20987-20987, PubMed 36470941 , DOI 10.1038/s41598-022-24772-8 ,
Related entities 1. Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155), : 1 : 3 : 14 entities Detail
Interaction partners 1. Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A (E.C.2.4.1.155), : 2 interactors Detail
Experiments performed 4 experiments Detail
Chemical shift validation 3 contents Detail
Keywords Glycosyltransferase, GnTV, Golgi, MEMBRANE PROTEIN, SPPL3, TMD, intramembrane