T-hairpin structure found in the RNA element involved in the piRNA biogenesis
Polymer type: polyribonucleotide
Total | 1H | |
---|---|---|
All | 53.2 % (74 of 139) | 53.2 % (74 of 139) |
Suger, PO4 | 49.0 % (47 of 96) | 49.0 % (47 of 96) |
Nucleobase | 62.8 % (27 of 43) | 62.8 % (27 of 43) |
Aromatic | 59.0 % (23 of 39) | 59.0 % (23 of 39) |
1. RNA (5'-R(*UP*UP*GP*GP*UP*UP*UP*GP*AP*UP*UP*CP*CP*AP*AP*G)-3')
UUGGUUUGAU UCCAAGSolvent system 95% H2O/5% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5, Details 0.3 mM None RNA (5'-R(*UP*UP*GP*GP*UP*UP*UP*GP*AP*UP*UP*CP*CP*AP*AP*G)-3'), 95% H2O/5% D2O
# | Name | Isotope labeling | Type | Concentration |
---|---|---|---|---|
1 | RNA (5'-R(*UP*UP*GP*GP*UP*UP*UP*GP*AP*UP*UP*CP*CP*AP*AP*G)-3') | natural abundance | RNA | 0.3 mM |
2 | sodium phosphate | natural abundance | buffer | 20 mM |
3 | sodium chloride | natural abundance | salt | 50 mM |
4 | H2O | natural abundance | solvent | 95 % |
5 | D2O | [U-2H] | solvent | 5 % |