BMRB: 4176

NMR Solution Structure of a DNA Dodecamer Containing Single G:T Mismatches

Authors

Allawi, H.T., SantaLucia, J.

Assembly

DNA dodecamer

Entity

1. DNA dodecamer (polymer, Thiol state: not present), 12 monomers, 3741.375 Da Detail

CGTGACGTTA CG

Formula weight

3741.375 Da

Exptl. method

NMR

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 96.6 %, Completeness (bb): 98.8 % Detail

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Polymer type: polydeoxyribonucleotide

	Total	1H
All	96.6 % (113 of 117)	96.6 % (113 of 117)
Suger, PO4	98.8 % (83 of 84)	98.8 % (83 of 84)
Nucleobase	90.9 % (30 of 33)	90.9 % (30 of 33)
Aromatic	95.8 % (23 of 24)	95.8 % (23 of 24)
Methyl	100.0 % (3 of 3)	100.0 % (3 of 3)

1. DNA dodecamer

CGTGACGTTA CG

Show sample condition

Sample

Temperature 298 (±1) K, pH 7 (±0.2)

#	Name	Isotope labeling	Type	Concentration
1	DNA dodecamer			3 mM

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Release date

2005-09-15

Citation 1

NMR Solution Structure of a DNA Dodecamer Containing Single G:T Mismatches
Allawi, H.T., SantaLucia, J.
Nucleic Acids Res. (1998), 26, 4925-4934, PubMed , DOI:

Show more 1 citaion

Citation 2

1H, 13C and 15N chemical shift referencing in biomolecular NMR
Wishart, D.S., Bigam, C.G., Yao, J., Abildgaard, F., Dyson, H.J., Oldfield, E., Markley, J.L., Sykes, B.D.
J. Biomol. NMR (1995), 6, 135-140, PubMed 8589602 , DOI 10.1007/bf00211777 , Abstract

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Experiments performed 3 experiments Detail