BMRBj - BMREntryMaster

Found 1 Document (0.256 seconds)

BMRB: 50691

Chemical shift assignment of thorarchaeota profilings

Authors

Chi, C.N.

Assembly

Thorarchaeota profilin

Entity

1. Thorarchaeota profilin (polymer), 145 monomers, 15770.46 Da Detail

GMAGYNLGTE WISLRSKLEM SDPVMEAYTQ AYEASNQMVQ AFGVIKADGS VLWQSNNWDL SADAQQLISA VNNQSASVKQ NDVKYSTIRT SPESLVARNV QGNGTLILAR IEDDKWVVAW ASADAAPDSV YVDIDRAAKA LKGKI

Formula weight

15770.46 Da

Source organism

Escherichia coli

Exptl. method

solution NMR

Data set

assigned_chemical_shifts, spectral_peak_list

Chem. Shift Complete

Sequence coverage: 97.9 %, Completeness: 66.4 %, Completeness (bb): 79.2 % Detail

Polymer type: polypeptide(L)

	Total	¹H	¹³C	¹⁵N
All	66.4 % (1081 of 1629)	78.5 % (655 of 834)	46.4 % (290 of 625)	80.0 % (136 of 170)
Backbone	79.2 % (684 of 864)	93.2 % (275 of 295)	64.6 % (276 of 427)	93.7 % (133 of 142)
Sidechain	58.1 % (524 of 902)	70.5 % (380 of 539)	42.1 % (141 of 335)	10.7 % (3 of 28)
Aromatic	21.8 % (24 of 110)	38.2 % (21 of 55)	0.0 % (0 of 50)	60.0 % (3 of 5)
Methyl	60.9 % (106 of 174)	92.0 % (80 of 87)	29.9 % (26 of 87)

1. entity 1

GMAGYNLGTE WISLRSKLEM SDPVMEAYTQ AYEASNQMVQ AFGVIKADGS VLWQSNNWDL SADAQQLISA VNNQSASVKQ NDVKYSTIRT SPESLVARNV QGNGTLILAR IEDDKWVVAW ASADAAPDSV YVDIDRAAKA LKGKI

Show sample condition

Sample

Solvent system 90% H2O/10% D2O, Pressure 1 atm, Temperature 298 K, pH 6.5

#	Name	Isotope labeling	Type	Concentration
1	Thorarchaeota profilin	[U-100% 13C; U-100% 15N]		0.5 mM

Release date

2021-01-11

Citation

Structural Characterization of a Thorarchaeota Profilin Indicates Eukaryotic-Like Features but with an Extended N-Terminus
Inturi, R., Lara, S., Derweesh, M., Chi, C.N.
Adv. Biol. (Weinh). (2022), 6, e2101323-e2101323, PubMed 35429148 , DOI 10.1002/adbi.202101323 , Abstract

Experiments performed 7 experiments Detail

Chemical shift validation 3 contents Detail

Properties

Input source #1: Assigned chemical shifts - Assigned chemical shifts	bmr50691_3.str
Diamagnetism of the molecular assembly	True (excluding Oxygen atoms)
Whether the assembly has a disulfide bond	None
Whether the assembly has a other bond	None
Whether the assembly contains a cyclic polymer	None
Overall data processing status	Warning

Disulfide bonds

None

Other bonds (neither disulfide, covalent nor hydrogen bonds, e.g. Zinc–sulphur bond)

None

Non-standard residues

None

Content subtype: bmr50691_3.str

#	Content subtype	Saveframe	Status	# of rows	Experiment type	Sequence coverage (%)
1	Assigned chemical shifts	assigned_chemical_shifts_1	Warning	1205		97.9 (chain: 1, length: 145)
1	Chemical shift references	chem_shift_reference_1	OK	3		No information

Assigned chemical shifts

Saveframe: assigned_chemical_shifts_1
- Status: Warning
- Sequence coverage of experimental data
  - Entity_assembly_ID: 1, Chain length: 145, Sequence coverage: 97.9%
- Total number of assignments
  - ¹H chemical shifts: 808
  - ¹³C chemical shifts: 261
  - ¹⁵N chemical shifts: 136
- Completeness of assignments
  - Entity_assemble_ID: 1
- Peptide bond of PRO
- Histogram of normalized assigned chemical shifts
- Random coil index and derived parameters (S² and NMR RMSD)
  - Chain_ID: 1

Comp_index_ID	Comp_ID	Atom_ID	CS value (ppm)
87	THR	HG1	5.071
105	THR	HG1	6.142

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	539	373	69.2
¹³C chemical shifts	335	125	37.3
¹⁵N chemical shifts	28	3	10.7

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	91	80	87.9
¹³C chemical shifts	91	19	20.9

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	834	646	77.5
¹³C chemical shifts	625	261	41.8
¹⁵N chemical shifts	170	136	80.0

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	295	273	92.5
¹³C chemical shifts	290	136	46.9
¹⁵N chemical shifts	142	133	93.7

Atom group	# of target shifts	# of assigned shifts	Completeness (%)
¹H chemical shifts	55	21	38.2
¹³C chemical shifts	50	0	0.0
¹⁵N chemical shifts	5	3	60.0

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Found 1 Document (0.256 seconds)

BMRB: 50691

Sample

Experiments performed 7 experiments Detail

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Chemical shift validation 3 contents Detail