BMRB: 5290

Investigation of Penetratin Peptides. Part 1: The Environment Dependent Conformational Properties of Penetratin and two of its Derivatives

Authors

Czajlik, A., Mesko, E., Penke, B., Perczel, A.

Assembly

third helix[W6F,W14F] of Antennapedia homeodomain

Entity

1. third helix[W6F,W14F] of Antennapedia homeodomain (polymer, Thiol state: not present), 16 monomers, 2168.652 Da Detail

RQIKIFFQNR RMKFKK

Formula weight

2168.652 Da

Source organism

Drosophila melanogaster

Exptl. method

NMR

Refine. method

simulated annealing and molecular dynamics

Data set

assigned_chemical_shifts

Chem. Shift Complete

Sequence coverage: 100.0 %, Completeness: 94.2 %, Completeness (bb): 96.9 % Detail

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Polymer type: polypeptide(L)

	Total	1H
All	94.2 % (129 of 137)	94.2 % (129 of 137)
Backbone	96.9 % (31 of 32)	96.9 % (31 of 32)
Sidechain	93.3 % (98 of 105)	93.3 % (98 of 105)
Aromatic	53.3 % (8 of 15)	53.3 % (8 of 15)
Methyl	100.0 % (4 of 4)	100.0 % (4 of 4)

1. third helix[W6F,W14F] of Antennapedia homeodomain

RQIKIFFQNR RMKFKK

Show sample condition

Sample

Temperature 300 (±1) K, pH 3 (±0.2)

#	Name	Isotope labeling	Type	Concentration
1	third helix[W6F,W14F] of Antennapedia homeodomain			1.5 mM
2	trifluoroethanol			90 %
3	water			10 %

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Calculated from 39 models in PDB: 1KZ2, Strand ID: A Detail

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Release date

2002-03-28

Citation

Investigation of penetratin peptides. Part 1. The environment dependent conformational properties of penetratin and two of its derivatives
Czajlik, A., Mesko, E., Penke, B., Perczel, A.
J. Pept. Sci. (2002), 8, 151-171, PubMed 11991205 , DOI 10.1002/psc.380 , Abstract

Related entities 1. third helix[W6F,W14F] of Antennapedia homeodomain, : 1 : 160 : 1 : 113 entities Detail

Interaction partners 1. third helix[W6F,W14F] of Antennapedia homeodomain, : 2 interactors Detail

Experiments performed 3 experiments Detail